Clone BO29153 Report

Search the DGRC for BO29153

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:291
Well:53
Vector:pDNR-Dual
Associated Gene/Transcriptl(2)k01209-RA
Protein status:BO29153.pep: Imported from assembly
Sequenced Size:1717

Clone Sequence Records

BO29153.complete Sequence

1717 bp assembled on 2011-09-20

GenBank Submission: KX795279

> BO29153.complete
GAAGTTATCAGTCGACATGTCTGTGACCCAGACGAAACAAATCAAGTTCT
ACAACCCATCGAGTTCCGCTAGCTCCGACAGCGATGACCGTTCACTCTCG
GATGTCACAGAGCAACTCTATGTGGATCCGTATGCCGACCTAAGCAATGG
CTTGCCCGGGGATCTCAACTGCTGTCCGGCCTCGCCCACCACAGTGCCTG
CTAAAGCATCGTTGGATTCGCCTCTTAAACGTTCCGGTAGGAGACAGCGA
ACCACATCCATTGGCAACCAGACCACCACAGCGAATCCGTCCGAATGCAT
CATACGCGCAAATAACCGCACGATCTACACGGCCGGACGACCGCCGTGGT
ACAATTGTGCTGGGCAACAGGTGGAGCCCTTCGTCATAGGAATCTGCGGC
GGTAGTGCCTCTGGCAAGACCACAGTGGCTGAGAAAATCATCGAAAGCCT
AGACGTTCCATGGGTAACACTGTTGTCCATGGACTGTTTCTACAAGATCC
TTAATGAGAAACAGCATGAGCAGGCCCTGATCAACGAATATAACTTCGAT
CACCCGGATGCCTTCGACATCGAGCTGCTGCTGGACGTGCTCACCAAGCT
GAAGGAGGGCCGAAAGGTGGAAGTTCCTGTCTATAATTTTGTGACACATG
GTCGTGAGAGCCAAACGAAAACCATGTACGGGGCCAATGTGATCATCTTC
GAGGGTATTCTTACCTTTCATAGTCCTGAAGTACTTAAATTGCTAGACAT
GAAGATATTTGTGGACACAGATCCCGATATTCGTCTGGCCAGGCGGTTAA
GAAGGGACATCTCTCAGCGCGGACGAGACCTCAAGGGCGTGCTGAAGCAA
TACCTTAATATGGTTAAGCCCTCCTATTGCAATTACATAGCTCCAACAAT
GGCCCATGCAGATATCATTGTTCCTCGTGGAGGCGACAACAAGGTGGCCA
TCCATCTCATTGTTCAGCACGTGCACACACAGCTGCAACTGCGCGGATTT
AAGCTGCGCGAAACTCTGGCCAACTCCTACAAGGACCAGCCAATGCCACA
TTCTCTGCACTTGCTGCATCCCACGCCCCAAATAAAGGGCCTGCACACGT
TCATCCGTTGCCGAAATACGTCCCGCGATGAGTTTATTTTTTACTCAAAG
CGCCTGATACGGCTAGTCATTGAATATGCGCTAAGCTTATTTCCCTTTAA
GAAAACAACAGTGGAGACTCCACAAGGTGTCCTTTACGAGGGCAAGCGTA
TGGAATCGCGAAAAATATGCGGCGTCTCAATTCTCCGAGCTGGTGAAACA
ATGGAACAAGCCGTTTGTGATGTGTGCAAGGACATTCGCATCGGAAAGAT
CCTCATCCAGACCAATCTTAAGACCGGCGAGCCGGAGCTTTACTACCTGA
GGCTGCCTAAAGACATAAAAGACTACAAGGTGATACTAATGGATGCCACC
GTGGCCACAGGAGCAGCGGCCATGATGGCCATTCGGGTGCTGCTGGATCA
CGATGTACCCGAGGACAACATTATCTTGGCCTCGCTTTTGATGGCTGAGA
TCGGTGTGCACTCCATTGCCTATGCCTTCCCAAAGGTGAAAATTGTTACT
TCCGCTCTGGATCCGGAGATTAATAGTAAGTTTTATGTTATACCCGGCAT
TGGTAACTTTGGCGATCGCTACTTTGGCACGGAACCCTCTGATGAGTACG
CAAGCTTTCTAGACCAT

BO29153.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:17:22
Subject Length Description Subject Range Query Range Score Percent Strand
l(2)k01209-RA 1686 CG4798-PA 1..1683 17..1699 8415 100 Plus
l(2)k01209-RD 1881 CG4798-PD 257..1878 78..1699 8095 99.9 Plus
l(2)k01209-RC 1881 CG4798-PC 257..1878 78..1699 8095 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:17:23
Subject Length Description Subject Range Query Range Score Percent Strand
l(2)k01209-RA 1881 CG4798-RA 97..1785 11..1699 8430 99.9 Plus
l(2)k01209-RD 2284 CG4798-RD 567..2188 78..1699 8095 99.9 Plus
l(2)k01209-RC 2380 CG4798-RC 663..2284 78..1699 8095 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:17:20
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17424818..17425416 991..1589 2995 100 Plus
2R 25286936 2R 17423653..17423964 79..390 1560 100 Plus
2R 25286936 2R 17424196..17424506 495..805 1555 100 Plus
2R 25286936 2R 17424571..17424759 803..991 945 100 Plus
2R 25286936 2R 17425468..17425583 1584..1699 580 100 Plus
2R 25286936 2R 17424026..17424134 388..496 545 100 Plus
2R 25286936 2R 17420503..17420573 11..81 340 98.6 Plus
Blast to na_te.dros performed on 2014-11-27 13:17:21 has no hits.

BO29153.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:55:42 Download gff for BO29153.complete
Subject Subject Range Query Range Percent Splice Strand
l(2)k01209-RD 77..140 17..80 100 -- Plus
l(2)k01209-RD 910..2529 81..1701 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:28:35 Download gff for BO29153.complete
Subject Subject Range Query Range Percent Splice Strand
l(2)k01209-RA 103..1785 17..1701 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:14:58 Download gff for BO29153.complete
Subject Subject Range Query Range Percent Splice Strand
l(2)k01209-RA 103..1785 17..1701 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:14:58 Download gff for BO29153.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17423656..17423963 82..389 100 -> Plus
2R 17424198..17424505 497..804 100 -> Plus
2R 17424573..17424759 805..991 100 -> Plus
2R 17420509..17420573 17..81 100 -> Plus
2R 17424028..17424134 390..496 100 -> Plus
2R 17424819..17425412 992..1585 100 -> Plus
2R 17425470..17425583 1586..1701 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:28:35 Download gff for BO29153.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13308014..13308078 17..81 100 -> Plus
arm_2R 13311161..13311468 82..389 100 -> Plus
arm_2R 13311533..13311639 390..496 100 -> Plus
arm_2R 13311703..13312010 497..804 100 -> Plus
arm_2R 13312078..13312264 805..991 100 -> Plus
arm_2R 13312324..13312917 992..1585 100 -> Plus
arm_2R 13312975..13313088 1586..1701 98   Plus

BO29153.pep Sequence

Translation from 16 to 1717

> BO29153.pep
MSVTQTKQIKFYNPSSSASSDSDDRSLSDVTEQLYVDPYADLSNGLPGDL
NCCPASPTTVPAKASLDSPLKRSGRRQRTTSIGNQTTTANPSECIIRANN
RTIYTAGRPPWYNCAGQQVEPFVIGICGGSASGKTTVAEKIIESLDVPWV
TLLSMDCFYKILNEKQHEQALINEYNFDHPDAFDIELLLDVLTKLKEGRK
VEVPVYNFVTHGRESQTKTMYGANVIIFEGILTFHSPEVLKLLDMKIFVD
TDPDIRLARRLRRDISQRGRDLKGVLKQYLNMVKPSYCNYIAPTMAHADI
IVPRGGDNKVAIHLIVQHVHTQLQLRGFKLRETLANSYKDQPMPHSLHLL
HPTPQIKGLHTFIRCRNTSRDEFIFYSKRLIRLVIEYALSLFPFKKTTVE
TPQGVLYEGKRMESRKICGVSILRAGETMEQAVCDVCKDIRIGKILIQTN
LKTGEPELYYLRLPKDIKDYKVILMDATVATGAAAMMAIRVLLDHDVPED
NIILASLLMAEIGVHSIAYAFPKVKIVTSALDPEINSKFYVIPGIGNFGD
RYFGTEPSDEYASFLDH

BO29153.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:12:17
Subject Length Description Subject Range Query Range Score Percent Strand
l(2)k01209-PA 561 CG4798-PA 1..561 1..561 2916 100 Plus
l(2)k01209-PD 626 CG4798-PD 72..626 7..561 2810 97.5 Plus
l(2)k01209-PC 626 CG4798-PC 72..626 7..561 2810 97.5 Plus
l(2)k01209-PB 626 CG4798-PB 72..626 7..561 2810 97.5 Plus
CG6364-PB 305 CG6364-PB 27..240 121..326 492 46.7 Plus