BO29155.complete Sequence
1057 bp assembled on 2011-08-26
GenBank Submission: KX796391
> BO29155.complete
GAAGTTATCAGTCGACATGAGGCCATACCAAGTAGTTTGCATCGTAGCAG
TAGCAGCTCTGCTGCTTTTGGAGGCGATTCCCGCGGATGCAAAGCGGCGC
AAGCACAAGGGCTCCGATCATCACTATGAAAAGTCTGATCCCCACAAGAC
CAAGACAAAGACCAAGTGGTCTAGCTCCACGGATTTGGCTGGAAACACTC
CAATTTCCACCGAAGAGCACGGCTACTATGTAAAGCGCACCTTTGCGGCT
CCCGGTGAGATTGGAGCCGCACAGAAGCGTCTAAGTCCCCCCTATTTGGC
CATTCCCATCGCCTGGTTCAGCTGTGAGTCGGGCCAGAAGAATTGCCAGT
CTTCCAATTCCGCGGCTATCAACAGTGCCGCGCAGTCCTTGAGCGAGGGC
TATCTGTGCGACGATGATTGCGATGAACTGTACGAGCCCATCTGCGGCAG
GACCACCTCAGAGGTGGCCGTTTTCTACAACAAGTGCAAGTTGGGTGTAG
CCAAGTGCCGATCCCACGGTCTTTGGACGGACTTCGCCTATGCCGAGTGC
CAGGCGAAATATCCGCAGGAAACTGCCTATGCCGACAAGAAGTTCCGGTC
ATCGCCTTATTTCCGGGATGCGGCCATCGTGGAGCAATTGAAGCTGGAGG
AGGAGAAGCGTAAGCAGGAGGAGGAACAACACAAGCTGGAGAAGGAGCAA
AAGAAGAAGGAGAAGGCTGAGAAAAATAAGAACGAGAAGGACAGCAGCGA
AAGCAGCGAGGAGAAGGATGACCAAAAGGAAAACAAGCAGAAGGATCCCC
TTTCCCTAATGCCACAGAAGAAAGTGGAATCCACCCAGAAGCCAGTGCCA
GTTCCTATTCAAGTAGCAGTTCCAAAACCAGTTTCAGTTTTGGAGCCTGC
AAAGACGACCGAGGACATCGCTATGCCGCCTATGCCACTGAAGGACACTC
CCACGCCCAAACCTCTGGAGATCGCGCCCCTTCACCAGCAGACCCAACCC
AAGGGCAAGGACATTGATAGGCTCAAGTACCAAGTAGCTGCAAGCTTTCT
AGACCAT
BO29155.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:45:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpL1-RA | 1026 | CG10717-PA | 1..1023 | 17..1039 | 5115 | 100 | Plus |
| ImpL1-RC | 1023 | CG10717-PC | 1..1020 | 17..1039 | 5035 | 99.7 | Plus |
| ImpL1-RB | 1101 | CG10717-PB | 104..1098 | 45..1039 | 4975 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:45:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpL1-RA | 1160 | CG10717-RA | 39..1063 | 15..1039 | 5125 | 100 | Plus |
| ImpL1-RC | 1157 | CG10717-RC | 39..1060 | 15..1039 | 5045 | 99.7 | Plus |
| ImpL1-RB | 1230 | CG10717-RB | 139..1133 | 45..1039 | 4975 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:45:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13382908..13383902 | 45..1039 | 4975 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 00:45:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TART-C | 11124 | TART-C TARTC 11124bp | 8767..8891 | 641..759 | 117 | 56.8 | Plus |
BO29155.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-26 13:54:45 Download gff for
BO29155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL1-RA | 49..1071 | 17..1041 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:33:16 Download gff for
BO29155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL1-RA | 41..1063 | 17..1041 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:08:56 Download gff for
BO29155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL1-RA | 41..1063 | 17..1041 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:08:56 Download gff for
BO29155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13382805..13382835 | 17..47 | 100 | -> | Plus |
| 3L | 13382911..13383902 | 48..1041 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:33:16 Download gff for
BO29155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13375905..13375935 | 17..47 | 100 | -> | Plus |
| arm_3L | 13376011..13377002 | 48..1041 | 99 | | Plus |
BO29155.pep Sequence
Translation from 16 to 1057
> BO29155.pep
MRPYQVVCIVAVAALLLLEAIPADAKRRKHKGSDHHYEKSDPHKTKTKTK
WSSSTDLAGNTPISTEEHGYYVKRTFAAPGEIGAAQKRLSPPYLAIPIAW
FSCESGQKNCQSSNSAAINSAAQSLSEGYLCDDDCDELYEPICGRTTSEV
AVFYNKCKLGVAKCRSHGLWTDFAYAECQAKYPQETAYADKKFRSSPYFR
DAAIVEQLKLEEEKRKQEEEQHKLEKEQKKKEKAEKNKNEKDSSESSEEK
DDQKENKQKDPLSLMPQKKVESTQKPVPVPIQVAVPKPVSVLEPAKTTED
IAMPPMPLKDTPTPKPLEIAPLHQQTQPKGKDIDRLKYQVAASFLDH
BO29155.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:59:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpL1-PA | 341 | CG10717-PA | 1..341 | 1..341 | 1797 | 100 | Plus |
| ImpL1-PC | 340 | CG10717-PC | 1..340 | 1..341 | 1781 | 99.7 | Plus |
| ImpL1-PB | 366 | CG10717-PB | 1..366 | 1..341 | 1761 | 93.2 | Plus |
