BO29157.complete Sequence
973 bp assembled on 2011-08-26
GenBank Submission: KX796749
> BO29157.complete
GAAGTTATCAGTCGACATGTTGCACTCAACTTTGATTTGTGCCACGCTCC
AAGCGCAGTTACTGCGCAAGGCCAGCCGCAAGTACGAGGACGCGGAGGGC
AAGCGAAAGAATAGCAACTCGGACAAGGAGGATGCCAGCGAACAGGCGCT
TATCCATGGCCGCAACTCCATTTCCACGGCGGCAGGTTCCACCACGGACA
TGCAGCATCGCCAGCGGAAACAGCGCAATCATCTCAATAACAATAATAGT
AAGCAAAATAGCTGTGATAAAACTGGCAACGATGACGACGACCGGGATCA
GCACGAATCGGAGGTGTTCCTCAAGGAGGGCGGCCGCATTGTCGAGCAGC
TCAAGTTAAAGACCTTCCCCAGCAGCCCGGCCCACTCGGCGGCCTCATCG
AACCAGACCGAACAAACCAACTCTATTGCCGCCTCCACCGCCACCGTAGA
TGTCCAGCTGGCTGGCCATCCCACCGACCCGTCCGTAGGTGGCGCCTCGG
AGCCACGTGCTCCGCTGGCCGGACACGATAGCATGCACAGTCTCAATGGC
AGCCTAAACGGAGAATCCGGACCGGTGAATGGCGCTCTCAAAGCACGGCT
GGATCGTGATGTGAACGCGGCGCTGGTGAATGACGCCGAGAGCGGTCGTC
GTCGTCCACAGAAACGGGGTGCCACCTACTTCACCATGCGCATCCTGGCC
CAGGCCTTCACAATGACGTTCCTGGCCGAGTGGGGCGATCGCTCCCAACT
GACCACCATTATTCTCGCCGCTAGCAAGGACGTTTACGGCGTTATCGCTG
GCGGTATTATTGGCCACTGCATCTGCACCGGCCTGGCTGTGATTGGTGGT
CGTCTCGTGGCTTCCAAAATCTCAGTGCGCACTGTCACCATTGTGGGTGG
CATTGTGTTCATCGGATTCGCCATCTACGCTGTCGCCATACCTCCGGATG
ACATTGCAAGCTTTCTAGACCAT
BO29157.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:46:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42542-RG | 942 | CG42542-PG | 1..939 | 17..955 | 4695 | 100 | Plus |
| CG42542-RD | 1512 | CG42542-PD | 611..1509 | 57..955 | 4495 | 100 | Plus |
| CG42542-RE | 1512 | CG42542-PE | 611..1509 | 57..955 | 4495 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:46:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42542-RG | 1550 | CG42542-RG | 81..1019 | 17..955 | 4695 | 100 | Plus |
| CG42542-RD | 2215 | CG42542-RD | 782..1680 | 57..955 | 4495 | 100 | Plus |
| CG42542-RE | 2190 | CG42542-RE | 757..1655 | 57..955 | 4495 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:46:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15200644..15201225 | 17..598 | 2910 | 100 | Plus |
| 3R | 32079331 | 3R | 15202023..15202204 | 598..779 | 910 | 100 | Plus |
| 3R | 32079331 | 3R | 15202264..15202442 | 777..955 | 895 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:46:28 has no hits.
BO29157.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-26 13:54:46 Download gff for
BO29157.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42542-RG | 86..1019 | 22..957 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:33:35 Download gff for
BO29157.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42542-RG | 86..1019 | 22..957 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:09:11 Download gff for
BO29157.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42542-RG | 86..1019 | 22..957 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:09:11 Download gff for
BO29157.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15200649..15201225 | 22..598 | 100 | -> | Plus |
| 3R | 15202024..15202203 | 599..778 | 100 | -> | Plus |
| 3R | 15202266..15202442 | 779..957 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:33:35 Download gff for
BO29157.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11026371..11026947 | 22..598 | 100 | -> | Plus |
| arm_3R | 11027746..11027925 | 599..778 | 100 | -> | Plus |
| arm_3R | 11027988..11028164 | 779..957 | 98 | | Plus |
BO29157.pep Sequence
Translation from 16 to 973
> BO29157.pep
MLHSTLICATLQAQLLRKASRKYEDAEGKRKNSNSDKEDASEQALIHGRN
SISTAAGSTTDMQHRQRKQRNHLNNNNSKQNSCDKTGNDDDDRDQHESEV
FLKEGGRIVEQLKLKTFPSSPAHSAASSNQTEQTNSIAASTATVDVQLAG
HPTDPSVGGASEPRAPLAGHDSMHSLNGSLNGESGPVNGALKARLDRDVN
AALVNDAESGRRRPQKRGATYFTMRILAQAFTMTFLAEWGDRSQLTTIIL
AASKDVYGVIAGGIIGHCICTGLAVIGGRLVASKISVRTVTIVGGIVFIG
FAIYAVAIPPDDIASFLDH
BO29157.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:59:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42542-PG | 313 | CG42542-PG | 1..313 | 1..313 | 1592 | 100 | Plus |
| CG42542-PD | 503 | CG42542-PD | 204..503 | 14..313 | 1524 | 99.7 | Plus |
| CG42542-PE | 503 | CG42542-PE | 204..503 | 14..313 | 1524 | 99.7 | Plus |
| CG42542-PF | 323 | CG42542-PF | 205..323 | 195..313 | 597 | 100 | Plus |
| CG42542-PC | 323 | CG4196-PB | 205..323 | 195..313 | 597 | 100 | Plus |
