Clone BO29159 Report

Search the DGRC for BO29159

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:291
Well:59
Vector:pDNR-Dual
Associated Gene/TranscriptCG4553-RA
Protein status:BO29159.pep: Imported from assembly
Sequenced Size:1123

Clone Sequence Records

BO29159.complete Sequence

1123 bp assembled on 2011-08-26

GenBank Submission: KX795995

> BO29159.complete
GAAGTTATCAGTCGACATGACTGCCCGCATGATCCAACGCGGCCTGCACA
CTGCTCGCTCCTGTCTGTTGGCGAGAGCTCCTCGTCGCGCAAATCCTGGA
CTAGGTTACCAGCTGGAGCAGCTGCAGGAGCACCCGGAAAAGAGCAGCGA
AGCTAGCGAGGATTACGCCGATCTGGAGTCGGATTTCATGGACGTGCAGA
AGACCCATCGGCAGTACGAGAGGGAGCAGCAGCAGCATCGCGACCGCATC
CGTCAGTTTATGATAAAGCACAAGTATTTCCGAGACGCCAAGTTGCCCAA
TCTCTTGCTTCATGCCGAAAAGGAGCAGATGCGCCTGCTGCACGAGCGAG
ATCCCGAGGAATGGAGCGTTGAGCGATTGGCCGAAAGTTTTCCCGCCACT
CCGGACATTGTGCAGAAAATTCTGCGGGCCAAGTGGCGACCGAGAAGTGT
GCAAAGGATACGCTCCCACGATGAAACCGTCATTAAAAACTGGCAGCTTT
TAGGGACGGGAAAGGGTGACTTCAGTATCCCACCGTCTCTTCTCCAGCAT
CTGCAGAAATTCGCCGAGCGAAGGTGGCAGGATCTGCGGGAGCTTAAAAT
CCAGGATTGGCCCACAAAATCACAACTACCGACTCCGCAAGGCAACGAAT
TCCGCAAACTGCTGGGCAGCAGTAGTAAAACAACAGAGGAGATGCCTACA
CCACAAATCCCATCCGGCTATGAAGCTCCACCCTCTGCTGCCGAAGATGA
AACCTATTTGTTGGACAAAATCCGTAATAAAAAGAAGATGCGGCTGCAGG
AGCTTAAGGAATTGCAGCTCGTTGAGTCTGCGCCCGCAGTTCCAGAGGAA
ATGAAGCGGCCCATCGAGAATCCCAGTGGCACCGGATTCCTGCCCAGTTT
CGTGCCCAAGTTTGCGAGCAGCGAGATTGTGATCAGTGCCGCGGATCAGC
GCAAGTATGAAATAACCCAGGTGAAAACACGCATTGTTATTCCCCGGAAA
CTGCATCGCCAAGGAGCCACTTACCGGGTGGAGGATGCCTATTACGATGA
CGATGGAGAGCTGCTCTACCGAGTGCCTGGAATGACCAGAGCCAGTGGTG
ATAAAGCAAGCTTTCTAGACCAT

BO29159.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:35:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG4553-RA 1092 CG4553-PA 1..1089 17..1105 5445 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:35:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG4553-RA 1280 CG4553-RA 63..1151 17..1105 5445 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:35:26
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25475765..25476853 1105..17 5445 100 Minus
Blast to na_te.dros performed on 2014-11-26 22:35:26 has no hits.

BO29159.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-26 13:54:44 Download gff for BO29159.complete
Subject Subject Range Query Range Percent Splice Strand
CG4553-RA 63..1151 17..1107 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:02:57 Download gff for BO29159.complete
Subject Subject Range Query Range Percent Splice Strand
CG4553-RA 63..1151 17..1107 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:05:08 Download gff for BO29159.complete
Subject Subject Range Query Range Percent Splice Strand
CG4553-RA 63..1151 17..1107 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:05:08 Download gff for BO29159.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25475761..25476853 17..1107 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:02:57 Download gff for BO29159.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21301483..21302575 17..1107 99   Minus

BO29159.pep Sequence

Translation from 16 to 1123

> BO29159.pep
MTARMIQRGLHTARSCLLARAPRRANPGLGYQLEQLQEHPEKSSEASEDY
ADLESDFMDVQKTHRQYEREQQQHRDRIRQFMIKHKYFRDAKLPNLLLHA
EKEQMRLLHERDPEEWSVERLAESFPATPDIVQKILRAKWRPRSVQRIRS
HDETVIKNWQLLGTGKGDFSIPPSLLQHLQKFAERRWQDLRELKIQDWPT
KSQLPTPQGNEFRKLLGSSSKTTEEMPTPQIPSGYEAPPSAAEDETYLLD
KIRNKKKMRLQELKELQLVESAPAVPEEMKRPIENPSGTGFLPSFVPKFA
SSEIVISAADQRKYEITQVKTRIVIPRKLHRQGATYRVEDAYYDDDGELL
YRVPGMTRASGDKASFLDH

BO29159.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:59:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG4553-PA 363 CG4553-PA 1..363 1..363 1891 100 Plus