BO29161.complete Sequence
781 bp assembled on 2011-08-26
GenBank Submission: KX796330
> BO29161.complete
GAAGTTATCAGTCGACATGAAAAAAATAATTAATACATCAAAGCCAAAGC
GCAAGTCCACTTCCATGAAAGTGGAGGAGACTAAGCTAGACGAGGCGCGC
TGGGGTAAGCCGCAGACAAAGGAAGGTGAGTCTGCAAATGGGATAGCAAA
TCCCTCAAATGACGATAAAAAGGAGCTGGCCAATTTCAAAGCCACCTTCA
ATTCCTGGGCCCCCGAGAAGAAACGCGAGAAGATGCACAAGGTAGGCGTC
ATCTTAATATCCAACATACCCAAGGACATGGACGGGGACTGCCTGAAGGA
AATCATGAACTTGCACAGCGTCGTCGGCAGAGTTTACGTGCAGCCGGAAA
CGCTGTCAAGTTTCAAGACAAAGAAGAACATGCGTAAGGGCTGGGTGGAG
TTCATTTCGAAAAGTGGGGCCAAAAAAATCGCTCTAGAGCTGAACAATAA
GCCTATAACCGATGGCAAGTCGTCCCGATTCCGTGGCTTGCTGTGGAAAA
TGAAGTTCCTGCCACGCTTCAAGTGGTACTATCTAACCGATCGCATGGAC
TACGAGCTGGCGGTTTGCAAAGTTCGCGTATGGTCGCAGGCCCGCAAGCG
GGCCACCTTCTGGTACGATCCCGACCAGATGGAGTATTTCAAGAAGCAAG
TGAAGAAGATGAAGAAGATGAAGAAGGTCAAGGAAGCGGAGATGGCTACC
AGGAATGCGGAGATGGCTGCCAAGAAAGCGGAGATGGCTGCCAAGAAATT
GAAGAAGTCTGCCGCAAGCTTTCTAGACCAT
BO29161.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:46:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6999-RA | 702 | CG6999-PA | 1..699 | 65..763 | 3495 | 100 | Plus |
| CG32706-RA | 693 | CG32706-PA | 1..690 | 65..763 | 3220 | 97.7 | Plus |
| CG32708-RA | 720 | CG32708-PA | 1..363 | 17..388 | 515 | 77.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:46:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6999-RA | 875 | CG6999-RA | 57..803 | 17..763 | 3735 | 100 | Plus |
| CG32706-RA | 872 | CG32706-RA | 68..805 | 17..763 | 3460 | 97.9 | Plus |
| CG32708-RA | 855 | CG32708-RA | 54..416 | 17..388 | 515 | 77.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:46:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9088839..9089242 | 360..763 | 2020 | 100 | Plus |
| X | 23542271 | X | 9087612..9088006 | 360..763 | 1820 | 97.3 | Plus |
| X | 23542271 | X | 9088423..9088767 | 17..361 | 1725 | 100 | Plus |
| X | 23542271 | X | 9087196..9087540 | 17..361 | 1650 | 98.6 | Plus |
| X | 23542271 | X | 9085985..9086320 | 17..361 | 470 | 77 | Plus |
| X | 23542271 | X | 9086448..9086626 | 387..565 | 355 | 79.9 | Plus |
| X | 23542271 | X | 22187491..22187611 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22192394..22192514 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22197295..22197415 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22202304..22202424 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22212449..22212569 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22217500..22217620 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22226694..22226814 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22231691..22231811 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22236686..22236806 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22241693..22241813 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22246721..22246841 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22251703..22251823 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22143179..22143299 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22147910..22148030 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22152963..22153083 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22158008..22158128 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22167776..22167896 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22163044..22163164 | 106..223 | 180 | 78.5 | Plus |
| X | 23542271 | X | 22172762..22172882 | 106..223 | 180 | 78.5 | Plus |
| X | 23542271 | X | 22177626..22177746 | 106..223 | 180 | 78.5 | Plus |
| X | 23542271 | X | 22182614..22182734 | 106..223 | 180 | 78.5 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:46:45 has no hits.
BO29161.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-26 13:54:47 Download gff for
BO29161.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6999-RA | 57..803 | 17..765 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:33:43 Download gff for
BO29161.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6999-RA | 57..803 | 17..765 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:09:17 Download gff for
BO29161.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6999-RA | 57..803 | 17..765 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:09:17 Download gff for
BO29161.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9088423..9088765 | 17..359 | 100 | -> | Plus |
| X | 9088839..9089242 | 360..765 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:33:43 Download gff for
BO29161.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8982456..8982798 | 17..359 | 100 | -> | Plus |
| arm_X | 8982872..8983275 | 360..765 | 99 | | Plus |
BO29161.pep Sequence
Translation from 16 to 781
> BO29161.pep
MKKIINTSKPKRKSTSMKVEETKLDEARWGKPQTKEGESANGIANPSNDD
KKELANFKATFNSWAPEKKREKMHKVGVILISNIPKDMDGDCLKEIMNLH
SVVGRVYVQPETLSSFKTKKNMRKGWVEFISKSGAKKIALELNNKPITDG
KSSRFRGLLWKMKFLPRFKWYYLTDRMDYELAVCKVRVWSQARKRATFWY
DPDQMEYFKKQVKKMKKMKKVKEAEMATRNAEMAAKKAEMAAKKLKKSAA
SFLDH
BO29161.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:59:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6999-PA | 233 | CG6999-PA | 1..233 | 17..249 | 1222 | 100 | Plus |
| CG32706-PA | 230 | CG32706-PA | 1..230 | 17..249 | 1151 | 96.1 | Plus |
| CG32708-PA | 239 | CG32708-PA | 1..234 | 1..225 | 559 | 54.2 | Plus |
| CG41562-PA | 213 | CG41562-PA | 1..208 | 1..234 | 360 | 40.9 | Plus |
| CG40813-PB | 213 | CG40813-PB | 1..207 | 1..233 | 356 | 40.6 | Plus |
