Clone BO29162 Report

Search the DGRC for BO29162

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:291
Well:62
Vector:pDNR-Dual
Associated Gene/TranscriptCG31702-RA
Protein status:BO29162.pep: Imported from assembly
Sequenced Size:1435

Clone Sequence Records

BO29162.complete Sequence

1435 bp assembled on 2011-09-19

GenBank Submission: KX799685

> BO29162.complete
GAAGTTATCAGTCGACATGAGTGGGAGGAGTATTCAACATTCCATTGAAG
TTGGGAAAGAGCGCAGGGACATGCGACACGAAGAGGATTGCAGAATGGAT
GAGCGCTTACGGACAAGACGTAAGATCGCAAATAAACTGGAGTCTGGTGG
CAAAACAGCACATGCTTTTGAGCGATTATTGGCAATTCGCACCATTAAAT
TGAGCAAGGGAAAATGTTCCGAAGACAGTGCAGAGCAGACGAAGTCTAGT
GATGATTGCAAGGCACAAACGCGTAAGGATGTAAATATCGAGGTCAAAGA
GACTTATTCCGGCGATTCCTCGCCTAACAGTGAGAGCGAGAATACAGCCC
AAAACGATCCGCAAATGAACGTAGAAAGCGAAGAACGCGTATCCAACCTG
GAACAGCTGAGTCGAGCAGTGTTAAAACGGAACGACATAAAGAACTTACT
GGGTAAACCTATTTTCGCGGAGGCTGTGATCGGATCCTTTGTGCGGATAA
ATGTTGGAAAAGTCTACTCCATCTACGAAACTATTGCTCTGCATCAGGAC
AGTAAGGACTACCGGGTAGACGGTAAGCGTACCAATCTGACCCTGGTCTT
GAGGTGCGGTTCCGAAAAGCGTTATTCACGTATAGACGTGGTTTCAAATC
AGCCAATTACACAAAAGGAATTCTTGTTGTGGTTGGAAACCAATCTGCGC
AATCGATGCACTTTACCAACGCTTAATGACATCGCCAAAAAACAGGTGCA
GGTAAAAAATGCCTGTAAATACTCGTACACTGAAACTGATGTGGAGAAGC
TGATTCAAGACAAAAAAGAAGCTGGTATAAAACAGAATGCCGCTTACAGA
AAAATTAGTCTAATTATAGAGCGTGATATGGCAGCGGGTATGAACGACGT
GGAAAAAGTGCAAGTGTTGGAGAAGAAAATCCTAGAGATCGACGAGGAAC
CCAGACCCCAGATCGAAAAATCTGGCCAGCATCGGTACCAAGTCCTTAGT
TCTACACGCGGGGTCCATGTGCCTACCATTTACCGGCACGAGTTGGGTGT
GCCTTCCGGCGGCAAAAGTTCCTTTGTTAAGCGAACCGCGAAGCCCGAAC
AACATGAGTTGGAGAAGTATATGCGACGAAAGTATAAAAAAAGTGCTGTA
GTCAGTCGCAGTCGATTTAAAAAAGCATTTGAAGATTGCGTGGATTCTTC
AGCTGTGGTCAACGATATTCATATGGAAAGTCAACAGAAAGAGGGTGATG
TCGAGACGGAGACGGAGACGGAGACGGAGAAAGGGACAGAGAAAGATCTC
CATTTGCAAAGGTTACACACTTTTAATATTGAATTAGATACCACGGGATT
GGTTCCTTTTCATGAAATTTTCCCGAATGTGAAGTTCAATAGCCCTTGGG
ACGAGATAATGAAAGGCGCAAGCTTTCTAGACCAT

BO29162.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:58:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG31702-RA 1326 CG31702-PA 1..1323 95..1417 6615 100 Plus
CG31703-RA 1320 CG31703-PA 1..1317 95..1417 6400 99.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:58:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG31702-RA 1710 CG31702-RA 76..1480 17..1417 6930 99.7 Plus
CG31703-RA 1727 CG31703-RA 97..1495 17..1417 6715 98.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:58:33
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22071219..22072558 17..1352 6605 99.7 Plus
2L 23513712 2L 22102972..22104305 1352..17 6390 98.8 Minus
2L 23513712 2L 22066516..22067157 94..735 3030 98.1 Plus
2L 23513712 2L 22072607..22072672 1352..1417 330 100 Plus
2L 23513712 2L 22102858..22102923 1417..1352 330 100 Minus
Blast to na_te.dros performed on 2014-11-27 07:58:34 has no hits.

BO29162.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-19 10:42:46 Download gff for BO29162.complete
Subject Subject Range Query Range Percent Splice Strand
CG31702-RA 67..1471 17..1419 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:07:00 Download gff for BO29162.complete
Subject Subject Range Query Range Percent Splice Strand
CG31702-RA 76..1480 17..1419 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:08:29 Download gff for BO29162.complete
Subject Subject Range Query Range Percent Splice Strand
CG31702-RA 76..1480 17..1419 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:08:29 Download gff for BO29162.complete
Subject Subject Range Query Range Percent Splice Strand
2L 22071219..22072558 17..1352 99 -> Plus
2L 22072608..22072672 1353..1419 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:07:00 Download gff for BO29162.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 22071219..22072558 17..1352 99 -> Plus
arm_2L 22072608..22072672 1353..1419 97   Plus

BO29162.pep Sequence

Translation from 16 to 1435

> BO29162.pep
MSGRSIQHSIEVGKERRDMRHEEDCRMDERLRTRRKIANKLESGGKTAHA
FERLLAIRTIKLSKGKCSEDSAEQTKSSDDCKAQTRKDVNIEVKETYSGD
SSPNSESENTAQNDPQMNVESEERVSNLEQLSRAVLKRNDIKNLLGKPIF
AEAVIGSFVRINVGKVYSIYETIALHQDSKDYRVDGKRTNLTLVLRCGSE
KRYSRIDVVSNQPITQKEFLLWLETNLRNRCTLPTLNDIAKKQVQVKNAC
KYSYTETDVEKLIQDKKEAGIKQNAAYRKISLIIERDMAAGMNDVEKVQV
LEKKILEIDEEPRPQIEKSGQHRYQVLSSTRGVHVPTIYRHELGVPSGGK
SSFVKRTAKPEQHELEKYMRRKYKKSAVVSRSRFKKAFEDCVDSSAVVND
IHMESQQKEGDVETETETETEKGTEKDLHLQRLHTFNIELDTTGLVPFHE
IFPNVKFNSPWDEIMKGASFLDH

BO29162.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:03:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG31702-PA 441 CG31702-PA 1..441 27..467 2252 100 Plus
CG31703-PA 439 CG31703-PA 1..439 27..467 2209 98.4 Plus
Rtf1-PB 775 CG10955-PB 311..737 29..441 305 25.6 Plus
Rtf1-PA 775 CG10955-PA 311..737 29..441 305 25.6 Plus
CG12498-PA 261 CG12498-PA 51..180 125..249 156 33.8 Plus