Clone BO29166 Report

Search the DGRC for BO29166

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:291
Well:66
Vector:pDNR-Dual
Associated Gene/TranscriptCG7058-RB
Protein status:BO29166.pep: Imported from assembly
Sequenced Size:3220

Clone Sequence Records

BO29166.complete Sequence

3220 bp assembled on 2011-09-19

GenBank Submission: KX794287

> BO29166.complete
GAAGTTATCAGTCGACATGGCACTGGTGCACACTTTCCTGGGCACCTGGG
AGATTGTCTGCTGCACCTTCGAGGGAAAACGAGAGCTGTCCGGTCTAGAG
GGCATCAAGTTCCGCCTGGATGACACCAGTGACATTACGTGGTACAACGA
TCTGGTCAGCCCGCTTCCGGAATCGAAAGACTGTGGCAACTTTTGCGAAT
CGGCCAGTGTTCTCTTCAGCTGCGAGACCTTCGATGTCCACGAGATCAAT
CCGCGCCTGGTCTTCGGCGCCTTTGCCGGCCACAGCATCGAGTTCAGCAC
CAACACCTTAACGCCGACTGATACGCTGGTTCTCAGCTGCGAGAACTGGT
ATGCCGTGGAGTGCAAGCGCCTGCAGGACAATCAAGCCGCTGGTCAGGAG
AAGCAACTGAGCTTCGGCGAGGCCCTACAGGAGTCCTACTTTAGCGATGT
GATGGTGAAGAGCTCCAGTGGCCTGGAGTACGCCCTGCACGCCTCCATAC
TGCGACTCAATGGCTTCGATTGCAGCATGTGCGTGAACAGTGCCCCGTCA
TCGGCTGCCGCTCGTCCTGCGGCCAGGTCCTGTCACAGTGGTCCGAACAC
CCCGAATCCCATACGCATCTCCGTGGCGCCGGCGTCCAACGACGATGGGC
ATGAGAAGTCCCTGCCGCGTCTGAATCTCTCGCCCATCTATCTGCAACCG
CCGTGCGACTTTCAGACCATGCCCTCGTCCGGATTGGGCGCCCAGCGCGT
GCATCAGTTCAGCAGCAGCTTCAATTGCCTGAGCAACGGCAACGCCGGGG
ACTCGGAGTCGGTGGTCAGGACCACGGGTCTGCTGAGCCTCGAATGTGGC
GGCGGTGGCGGTATGTACCGTCTGCCGCCCACTTCGCATTCGGATTCGCA
CCTGGAGACATCGCAGTCGCATTGCAAGAACATCTTTAACTTCTGCCAGG
ACCTGATGCTGCAGCCAACGCCCACTCCCATGCCGCCGACCACAGGTCTG
GCCATTTGCAGCATCCGGAGGCCACCACTATCGCCGTACCGTGCTCGCAG
TCCCTCGCCTTTTCCCAGCTCCATGGACACGCCGCCATCGTCGCCGCTGA
CGCCCGTGGGCGTGCTGTGTAATCTGCCCAACTTCCTGCTGGGCCCCATC
CTGCACTGGCTGTACACGGAGTCCCTGCTTCCGGATCTGGACGAGGATGT
GTGCGAGAAGCTCATCAGCTTCGCGGAACTGCAGCCATCGCTAACCAAGC
TGGTGGAGCCGACACGCAAATACCTGCGGCTGATACGACTCAAGAAGTTT
GTGGTCAATGTTACAATGGATCTGCACGGCATTCTCAATCGGGTCATACA
GTGCATCAATCCCGGGAATATAACCCGCGATCCGGCGCAACTCTATGCGA
CCTTTCAGGATGCCTTGCGCGAGTGTGCCATAGGCTGCGCCAAGGTGCTA
CAGTTCTGCAATATCTTCATTACGGATGCCGCACACATGACACGATATCA
GAAGAACGAAATCGTCAAGTACATCCGCACCCGCATTCCCATCTTTATGT
CGCAAATTCAACAGCTGCTACAGAACGTACTCGGAGTCTTTGTGGGTCTG
AGTGTGGACGAGAAAGCCGAGCTGGTTAATTACCTAGTACCTGAAATCGA
ATCAACCTTATTTGTATTGACCGCTGTGATAGAGGAAATCAAAAACTCAC
TGGAAATCATGTGTAAGGACCTTAAATGCTCCCACTTGGATCTGCCCCTA
CAACAACAACAGGCGGAAGATGCCATTGTCATGCAACTGCAGATTGCCGA
TGGAGGCGAACCCTCGCCACGTCCTCGTCGCGGTGCTCCAGTGGGTCTAA
CGCTCTACGATAATCTCTCGGACAAGCAGCGTCTAAGTTCGGCAGAAAAT
GACCTCAAGTTTGTGCTCTACATGTACGAGGTGCGGAAAATGCGTGACAT
TTACGGCAGAATTGTGGCGGCGCTCGAAATAATCAAGGACAAGAAGACTA
CGTTCTGCGAAATGGATTTCCTGAGCAAAAGCAGCACAATCAACCAAAAC
CTCGAGCAACTGATTATGGACATTCCCGCTTACATCTTCATCGTGGAGAA
CCTATCCGATCGACTGGACGACAAGCTGGGCTGGAAGGAGTTTAAATTCT
GCTTTAAGCTGGCCACAAGTCAGATTAATGGCGTCATTGCCAAGCTACTG
GAGCACAAGGACGCCCTGCGAGACGCCATCAGTCAGATCTGCATGCTGGT
GCGCAAACAGGAGTTCACTCAGTCCGTGATTGAGCTGGGATTGCTGGACG
ACACCTGCTTGCTGTCGAACAATTTGAAAATGGCTGATCACGAGAACAAT
CTAAATCAGGGCCTGAGCGAGAAGGATTCAATGTATCTGGATCGCAAACA
ATACTATGATTATAATAGCATTAAGTTAAACCTCATTCGGCACCTATGTG
AGCCACCCATAGCCGCCAGCAGCAATCTCTCGAAGAATGCCCTACGCCTG
CTGCACTCCACCCAGCTGGCCGACATGGAGTTCGAGGTTCACACATACGC
ACCCACGTCTGGTGCTGCCAAGTCAGGAGGCGGAACTGAAGCGGTTCCTG
AAACCGCTGAGCCGGCAGCAAAAGTCCTGCAGGTGCACAGCTTCAAGGCA
CATCGGGTGATCGTTGCCGCACGCTGTGAGTGGTTCAAGAAGGCCCTGAT
GTCGGGCATGCAGGAGTCGATCAACCGGAAGGTCATCATCACGGACACCT
CACCCGTGATCTTCCGACGCCTGCTCCTCTATCTCTATGGCGCTCCTATT
GATCGTACAGTTGGTGCCGAACAGGTGTGCGAGCTTATGCTCCTGGCAGA
TCGATACTCTATAGATGATCTTAAGGAATTGTGCGAAAACACCCTATACT
CTCTCATTGACGAGGACTCCGTGGTCTGCCTACTGGGAATAGCCGATCGA
TATATGGCCACTGCTTTAAAGTCGAAATGTCTTTCTTTTCTCTCGCAACA
TGCACAACTGACCAAGTGTGAAATATTCAAGGAATTGCCGCAGACACTTC
AGCTGGAGGTTATGGATTTGATACACTGGTTCGGACGGGTCTCGGAGCCG
TGGAACGATCGCGGCTTTAAGCCGCGTAGCAGCTCGCGCCACAGCCTAAA
GAGTCCTTCGAAGCCGCGCTCGCGATCGCGCAAGTCCTCGCCCTCCTACA
TGGCAAGCTTTCTAGACCAT

BO29166.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:04:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG7058-RB 3189 CG7058-PB 1..3186 17..3202 15930 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:04:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG7058-RB 4548 CG7058-RB 295..3484 13..3202 15950 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:04:25
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18807474..18808473 299..1298 5000 100 Plus
X 23542271 X 18810026..18810478 2424..2876 2265 100 Plus
X 23542271 X 18809135..18809415 1716..1996 1405 100 Plus
X 23542271 X 18809716..18809968 2177..2429 1250 99.6 Plus
X 23542271 X 18808726..18808940 1431..1645 1075 100 Plus
X 23542271 X 18807204..18807400 102..298 985 100 Plus
X 23542271 X 18809473..18809653 1996..2176 905 100 Plus
X 23542271 X 18810537..18810715 2874..3052 895 100 Plus
X 23542271 X 18810784..18810938 3048..3202 775 100 Plus
X 23542271 X 18808536..18808671 1299..1434 680 100 Plus
X 23542271 X 18809002..18809074 1646..1718 365 100 Plus
X 23542271 X 18807102..18807153 51..102 260 100 Plus
X 23542271 X 18806988..18807027 13..52 200 100 Plus
Blast to na_te.dros performed on 2014-11-27 08:04:26 has no hits.

BO29166.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-19 10:42:49 Download gff for BO29166.complete
Subject Subject Range Query Range Percent Splice Strand
CG7058-RB 299..3484 17..3204 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:07:46 Download gff for BO29166.complete
Subject Subject Range Query Range Percent Splice Strand
CG7058-RB 299..3484 17..3204 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:10:27 Download gff for BO29166.complete
Subject Subject Range Query Range Percent Splice Strand
CG7058-RB 299..3484 17..3204 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:10:27 Download gff for BO29166.complete
Subject Subject Range Query Range Percent Splice Strand
X 18809716..18809964 2177..2425 100 -> Plus
X 18806992..18807027 17..52 100 -> Plus
X 18807104..18807153 53..102 100 -> Plus
X 18807205..18807400 103..298 100 -> Plus
X 18807474..18808473 299..1298 100 -> Plus
X 18808536..18808670 1299..1433 100 -> Plus
X 18808729..18808940 1434..1645 100 -> Plus
X 18809002..18809073 1646..1717 100 -> Plus
X 18809137..18809414 1718..1995 100 -> Plus
X 18809473..18809653 1996..2176 100 -> Plus
X 18810028..18810477 2426..2875 100 -> Plus
X 18810539..18810715 2876..3052 100 -> Plus
X 18810789..18810938 3053..3204 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:07:46 Download gff for BO29166.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 18701025..18701060 17..52 100 -> Plus
arm_X 18701137..18701186 53..102 100 -> Plus
arm_X 18701238..18701433 103..298 100 -> Plus
arm_X 18701507..18702506 299..1298 100 -> Plus
arm_X 18702569..18702703 1299..1433 100 -> Plus
arm_X 18702762..18702973 1434..1645 100 -> Plus
arm_X 18703035..18703106 1646..1717 100 -> Plus
arm_X 18703170..18703447 1718..1995 100 -> Plus
arm_X 18703506..18703686 1996..2176 100 -> Plus
arm_X 18703749..18703997 2177..2425 100 -> Plus
arm_X 18704061..18704510 2426..2875 100 -> Plus
arm_X 18704572..18704748 2876..3052 100 -> Plus
arm_X 18704822..18704971 3053..3204 98   Plus

BO29166.pep Sequence

Translation from 16 to 3220

> BO29166.pep
MALVHTFLGTWEIVCCTFEGKRELSGLEGIKFRLDDTSDITWYNDLVSPL
PESKDCGNFCESASVLFSCETFDVHEINPRLVFGAFAGHSIEFSTNTLTP
TDTLVLSCENWYAVECKRLQDNQAAGQEKQLSFGEALQESYFSDVMVKSS
SGLEYALHASILRLNGFDCSMCVNSAPSSAAARPAARSCHSGPNTPNPIR
ISVAPASNDDGHEKSLPRLNLSPIYLQPPCDFQTMPSSGLGAQRVHQFSS
SFNCLSNGNAGDSESVVRTTGLLSLECGGGGGMYRLPPTSHSDSHLETSQ
SHCKNIFNFCQDLMLQPTPTPMPPTTGLAICSIRRPPLSPYRARSPSPFP
SSMDTPPSSPLTPVGVLCNLPNFLLGPILHWLYTESLLPDLDEDVCEKLI
SFAELQPSLTKLVEPTRKYLRLIRLKKFVVNVTMDLHGILNRVIQCINPG
NITRDPAQLYATFQDALRECAIGCAKVLQFCNIFITDAAHMTRYQKNEIV
KYIRTRIPIFMSQIQQLLQNVLGVFVGLSVDEKAELVNYLVPEIESTLFV
LTAVIEEIKNSLEIMCKDLKCSHLDLPLQQQQAEDAIVMQLQIADGGEPS
PRPRRGAPVGLTLYDNLSDKQRLSSAENDLKFVLYMYEVRKMRDIYGRIV
AALEIIKDKKTTFCEMDFLSKSSTINQNLEQLIMDIPAYIFIVENLSDRL
DDKLGWKEFKFCFKLATSQINGVIAKLLEHKDALRDAISQICMLVRKQEF
TQSVIELGLLDDTCLLSNNLKMADHENNLNQGLSEKDSMYLDRKQYYDYN
SIKLNLIRHLCEPPIAASSNLSKNALRLLHSTQLADMEFEVHTYAPTSGA
AKSGGGTEAVPETAEPAAKVLQVHSFKAHRVIVAARCEWFKKALMSGMQE
SINRKVIITDTSPVIFRRLLLYLYGAPIDRTVGAEQVCELMLLADRYSID
DLKELCENTLYSLIDEDSVVCLLGIADRYMATALKSKCLSFLSQHAQLTK
CEIFKELPQTLQLEVMDLIHWFGRVSEPWNDRGFKPRSSSRHSLKSPSKP
RSRSRKSSPSYMASFLDH

BO29166.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:03:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG7058-PB 1062 CG7058-PB 1..1062 1..1062 5532 100 Plus