BO29175.complete Sequence
814 bp assembled on 2011-08-26
GenBank Submission: KX797680
> BO29175.complete
GAAGTTATCAGTCGACATGGCCAGTCGCCAAGCCGGTTTCGTCCTAGACG
CCAAGTCCATGGGTCTGAATCCGTCGAGACCTGCATCATCGCCACCGCCA
CCACCATCATCTGCCAGTCAAATGTGTCGGCAAGTGCAGCCAACCGGAAC
GAGTGCCTCGCATCCACATCAAGAATCGACGCTAAAAGCCTCATCTCCTG
ATCGGTGCACTGCCAGCACCGAGGCGATGTCCACCGAACATTACCGCTGT
CTGATCCAGAAGCTGCGGGATACCAACGGCGATGCTGGCGATATGAGCTT
TGAGCTGAACAGCATATTTCTGAAGCGGCTGGACGAGATTGACTGCCTAG
ATGAGCACGAGGGTGATGACATGCACACTTGCCAGTTGCGTCTGGTCACT
TTTCAGGAGTGGGTGGATTTCCTGCTCCACGTGAACAGCGTGATCCTGGG
CAACGTGTCGGACTTGGAGAAGGAGGCGTACAGCAAGATCGTTGCCTGCT
GTCAGTCTGTCCAAGTGCGACAACAGCATACCCTCGAGGAGAATCGTAGG
CTGCGTGAGGACATTTGTGCGATCATAGAACGCGTGCAGCATTCTCCTCA
CTGCACCGACTTTGATTTCAATGGCATTTCCCTAGAGACACTGACCGTTA
ATCAATTGCGGGGCGTGGGAAAGGATCCCGCCCACGCGGAATGCGAGAGC
GAGAAGGTAGGCCATAGATCCTTGAAGGGAAAAGGCGGCGGTGATTCCAA
TGTCAAGTGGGACCCGAAGTCGTCCCACAAGCGCGAGAACTCTAAAGCAA
GCTTTCTAGACCAT
BO29175.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:47:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| yuri-RI | 783 | CG31732-PI | 1..780 | 17..796 | 3900 | 100 | Plus |
| yuri-RQ | 2946 | CG31732-PQ | 1..690 | 17..706 | 3450 | 100 | Plus |
| yuri-RC | 1737 | CG31732-PC | 1..690 | 17..706 | 3450 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:47:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| yuri-RI | 956 | CG31732-RI | 101..881 | 16..796 | 3905 | 100 | Plus |
| yuri-RQ | 3658 | CG31732-RQ | 566..1256 | 16..706 | 3455 | 100 | Plus |
| yuri-RC | 2555 | CG31732-RC | 566..1256 | 16..706 | 3455 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:47:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15263242..15263665 | 796..373 | 2120 | 100 | Minus |
| 2L | 23513712 | 2L | 15263770..15264127 | 373..16 | 1790 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:47:41 has no hits.
BO29175.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-26 13:54:49 Download gff for
BO29175.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| yuri-RI | 102..881 | 17..798 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:34:15 Download gff for
BO29175.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| yuri-RI | 102..881 | 17..798 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:09:48 Download gff for
BO29175.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| yuri-RI | 102..881 | 17..798 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:09:48 Download gff for
BO29175.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15263239..15263664 | 374..798 | 99 | <- | Minus |
| 2L | 15263770..15264126 | 17..373 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:34:15 Download gff for
BO29175.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15263239..15263664 | 374..798 | 99 | <- | Minus |
| arm_2L | 15263770..15264126 | 17..373 | 100 | | Minus |
BO29175.pep Sequence
Translation from 16 to 814
> BO29175.pep
MASRQAGFVLDAKSMGLNPSRPASSPPPPPSSASQMCRQVQPTGTSASHP
HQESTLKASSPDRCTASTEAMSTEHYRCLIQKLRDTNGDAGDMSFELNSI
FLKRLDEIDCLDEHEGDDMHTCQLRLVTFQEWVDFLLHVNSVILGNVSDL
EKEAYSKIVACCQSVQVRQQHTLEENRRLREDICAIIERVQHSPHCTDFD
FNGISLETLTVNQLRGVGKDPAHAECESEKVGHRSLKGKGGGDSNVKWDP
KSSHKRENSKASFLDH
BO29175.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:59:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| yuri-PI | 260 | CG31732-PI | 1..260 | 1..260 | 1379 | 100 | Plus |
| yuri-PC | 578 | CG31732-PC | 1..241 | 1..239 | 1217 | 96.7 | Plus |
| yuri-PB | 890 | CG31732-PB | 1..241 | 1..239 | 1217 | 96.7 | Plus |
| yuri-PQ | 981 | CG31732-PQ | 1..241 | 1..239 | 1217 | 96.7 | Plus |
| yuri-PD | 564 | CG31732-PD | 1..227 | 15..239 | 1151 | 96.5 | Plus |
