Clone BO29186 Report

Search the DGRC for BO29186

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:291
Well:86
Vector:pDNR-Dual
Associated Gene/TranscriptBili-RB
Protein status:BO29186.pep: Imported from assembly
Sequenced Size:2518

Clone Sequence Records

BO29186.complete Sequence

2518 bp assembled on 2011-09-21

GenBank Submission: KX795464

> BO29186.complete
GAAGTTATCAGTCGACATGGAGCCAAATCATTATTACTGCCGGAGCGCCA
TGCAGCAGAATCCCTCGACTTCCATTCCCCAACATGCGTCGAACAAACTC
AACTATGGGATGAACGCTGGCCAGGATTATGTGACATGTAGCTCCGGCCA
ATCGCAATCGGGCTACAGCTCCAAGGACTTGGTTCCGCGCAGTGGGAACA
GCAAAACGCTCGGCGGGAATGGCAACATGGGGAGTCCGTACGGAGGATCT
GTGTGCAGCAACAGTGGCCAATGCAGCAAGAATACTGCCAACGCTGGGAA
CTATATCAACATAATGACTGTTCCACTGGGAACACTGCAGTATAATCGAA
AAAAGCTATCTACACAAGACTACGAATCGCATTTATATTACAACACTACG
GATGTGAAGTGTCGCGATGATTACTATATAGCCAACAATGCCGCAGCAGC
AATACCGCAGCACCAAGCTCATCAACCGCATCAGCAGCCGCATCAGCACC
AACATCCGCAGCATCAGCAGCAGCATCAGCAACACCAGCAACACCAACAG
CACCAGCAACATCAGCAACATCTGCACCAGCAGCAGCAGCAACAGGCAAA
CTTTCTCCACATCCAACAATCGCTACAACACAACCACCAATTGAGCCACC
CAGAACCAATCCATCAGTTGCCCCAATTACAGGGCACGGTGGCCGATCCA
CCAGATGCCTTCGACAACTGTGCGATCTTCCCGAGCGCCGGCGGCAGCAG
CAACGGAAGTGGACGCGTGGCAGCCACTCAAACCCATCAGAACCCATCCG
GTGTGGTCACGTGCGACCAGCAGGTACCCGTGTCCCTGGGCTCGGTGAAT
ATGCCCGTTCCCCCAATCATGTATACCGTGCATCGTGTGGTGACCACAGC
TCAGATCCAAACGGCAGCGGGCAGCACCTTCGCCTCGTCGGCTAGTGTGT
CCAGTGTGGTCAGCACTGGCCAGAATGATGGTGACTGCCTGTCGCCGGCA
CAGGTGTCCTCCGCCATGGCCGCCTCTGGAAATGCTTCCTGTCTGGGTGG
ATTACCCGACATGGGCGCCAACATGATGAGCAATGCAAGTGCACTTTGTC
CCCTTTCCGACCTGAGGAGCCCATCCGGAGTGCTCACCAATTCCTCATAC
ATGCCACAACATCACAAGTGCAACAATGGGAATGATGCCCAATCCAATCC
CGCAATCCAAAAACGCCTGATGGCGACCAGCTCAACTTCGAACTTCGCGA
CTGCCGGCAAAGCTGCTTCCAATTTAACCCGTGCTCTCCAAAATGTGATC
CCCACATGCGTGTATCTTATGTCCCGGGTGGCGGTGCACATGGAGATCGA
GGGCACTGCCCAGTGTCCATCGCAAGTGATGTTGGCAGCCGCCTTGGGAT
GCGAGGAGCTGGGCATATCCAATAAGTTGCTGGCACAGAGCGTGTTCGGA
TTGTGGATGACAAGTGCTTTACTGGAGATGCAGCTGAAGGCCCACCACTG
CCCCTACATAGTGCGAGTTGCGTGGCCCAATCTCCTCCAGAAGTTCAGCA
ACAGCAGTCCCAGTGATCGAAAGTTCGATGAGCCCATGATAGTTTTGAAG
CGGAATGTCTTCTTCTCGAAGCGAGATGAGGAGAAAATAAAGGATCATCG
GATCTTGGAGCTCCTCTATGAAGAGGCCAGAAACAATGTGCTGACAGGCA
GATATATCATGGAGCCGGTGCATTCGCTAATGTTGGGTGGCATTCAAGCG
CGCATCGAACTGGGTCCTTACAACTCCCACACCCATACAATAGGATTCTT
TCGGGAGAACCAAGCTAGATTTTTGCCTCCTCACGTGGCCAAGAGCTCCA
CTTGGCTGTGGCTACCGATCAGTCAGAAGAATTCTGCGGAAGTGAAGCTT
CTGGAGCAATTCAAGCGAGTGCCCCAGACGGCCACCACACGAAAGTTGAT
GAGGAAATACCTGGAATTCTGCTGGGCTCTGCCATTCTATGGCGCCGCAT
ATTTTCATGGCCAAATAGAACAACCTGTTAGGGGAATTATGGCACTGGTC
AACCAAAAGGACATGGAGGTTTTGGTCGCTGTCAATGAGAGAGGGGTTTT
CGTAATAGATCCGTACGAATGTACCCTCTTGCTGGGATTGCGATACGAGG
ATTTGTCGTGGGATTACGCAAAGCCAAGTGCAAGTGATGATCCCGAATGC
CTCACTTGTATCTTCCTGCAGTTCGATGCCGTCGAGAACGGAATACAAGT
GTCCAAACTGATGCAAATATTTTCAAAGCAAGCTGCCATGATAGACGCAC
TTATATCACACTTTACAGATCAAATCAGAAACAAAAAACAGGAGGGTAAC
ACTCAAGAACCTTTTCACGATGAGCCAAATCCTATTCAAAATAATGGAAA
TGGAGTCTTATGCAATAAGCTGTCTCGATTAACTTTGGCCACCTTCGATG
AAGAGGGAGGTCGTTGCATTGGGCAAATGGGATCATTATCTATAAGCTAT
GCAAGCTTTCTAGACCAT

BO29186.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:37:50
Subject Length Description Subject Range Query Range Score Percent Strand
Bili-RH 2487 CG11848-PH 1..2484 17..2500 12420 100 Plus
Bili-RG 2487 CG11848-PG 1..2484 17..2500 12420 100 Plus
Bili-RF 2487 CG11848-PF 1..2484 17..2500 12420 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:37:51
Subject Length Description Subject Range Query Range Score Percent Strand
Bili-RH 4154 CG11848-RH 613..3098 15..2500 12430 100 Plus
Bili-RG 3901 CG11848-RG 360..2845 15..2500 12430 100 Plus
Bili-RF 3781 CG11848-RF 240..2725 15..2500 12430 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:37:47
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25133016..25133768 376..1128 3765 100 Plus
Y 3667352 Y 3050664..3051262 515..1122 2475 94.6 Plus
3R 32079331 3R 25132593..25132953 15..375 1805 100 Plus
3R 32079331 3R 25134052..25134399 1295..1642 1740 100 Plus
3R 32079331 3R 25134687..25134880 1799..1992 955 99.5 Plus
3R 32079331 3R 25133829..25133998 1127..1296 850 100 Plus
3R 32079331 3R 25134463..25134625 1642..1804 815 100 Plus
3R 32079331 3R 25135303..25135458 2217..2372 780 100 Plus
3R 32079331 3R 25134946..25135076 1992..2122 655 100 Plus
3R 32079331 3R 25135525..25135653 2372..2500 645 100 Plus
Y 3667352 Y 3050518..3050664 180..326 630 95.2 Plus
3R 32079331 3R 25135150..25135248 2123..2221 495 100 Plus
Blast to na_te.dros performed on 2014-11-27 13:37:49 has no hits.

BO29186.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 14:00:50 Download gff for BO29186.complete
Subject Subject Range Query Range Percent Splice Strand
Bili-RD 195..2678 17..2502 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:31:09 Download gff for BO29186.complete
Subject Subject Range Query Range Percent Splice Strand
Bili-RE 306..2789 17..2502 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:22:53 Download gff for BO29186.complete
Subject Subject Range Query Range Percent Splice Strand
Bili-RF 242..2725 17..2502 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:22:53 Download gff for BO29186.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25132595..25132953 17..375 100 -> Plus
3R 25133016..25133767 376..1127 100 -> Plus
3R 25133830..25133996 1128..1294 100 -> Plus
3R 25134052..25134398 1295..1641 100 -> Plus
3R 25134463..25134628 1642..1807 98 -> Plus
3R 25134696..25134880 1808..1992 100 -> Plus
3R 25134947..25135076 1993..2122 100 -> Plus
3R 25135150..25135248 2123..2221 100 -> Plus
3R 25135308..25135458 2222..2372 100 -> Plus
3R 25135526..25135653 2373..2502 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:31:09 Download gff for BO29186.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20960669..20960798 1993..2122 100 -> Plus
arm_3R 20960872..20960970 2123..2221 100 -> Plus
arm_3R 20961030..20961180 2222..2372 100 -> Plus
arm_3R 20961248..20961375 2373..2502 98   Plus
arm_3R 20958317..20958675 17..375 100 -> Plus
arm_3R 20958738..20959489 376..1127 100 -> Plus
arm_3R 20959552..20959718 1128..1294 100 -> Plus
arm_3R 20959774..20960120 1295..1641 100 -> Plus
arm_3R 20960185..20960350 1642..1807 98 -> Plus
arm_3R 20960418..20960602 1808..1992 100 -> Plus

BO29186.pep Sequence

Translation from 16 to 2518

> BO29186.pep
MEPNHYYCRSAMQQNPSTSIPQHASNKLNYGMNAGQDYVTCSSGQSQSGY
SSKDLVPRSGNSKTLGGNGNMGSPYGGSVCSNSGQCSKNTANAGNYINIM
TVPLGTLQYNRKKLSTQDYESHLYYNTTDVKCRDDYYIANNAAAAIPQHQ
AHQPHQQPHQHQHPQHQQQHQQHQQHQQHQQHQQHLHQQQQQQANFLHIQ
QSLQHNHQLSHPEPIHQLPQLQGTVADPPDAFDNCAIFPSAGGSSNGSGR
VAATQTHQNPSGVVTCDQQVPVSLGSVNMPVPPIMYTVHRVVTTAQIQTA
AGSTFASSASVSSVVSTGQNDGDCLSPAQVSSAMAASGNASCLGGLPDMG
ANMMSNASALCPLSDLRSPSGVLTNSSYMPQHHKCNNGNDAQSNPAIQKR
LMATSSTSNFATAGKAASNLTRALQNVIPTCVYLMSRVAVHMEIEGTAQC
PSQVMLAAALGCEELGISNKLLAQSVFGLWMTSALLEMQLKAHHCPYIVR
VAWPNLLQKFSNSSPSDRKFDEPMIVLKRNVFFSKRDEEKIKDHRILELL
YEEARNNVLTGRYIMEPVHSLMLGGIQARIELGPYNSHTHTIGFFRENQA
RFLPPHVAKSSTWLWLPISQKNSAEVKLLEQFKRVPQTATTRKLMRKYLE
FCWALPFYGAAYFHGQIEQPVRGIMALVNQKDMEVLVAVNERGVFVIDPY
ECTLLLGLRYEDLSWDYAKPSASDDPECLTCIFLQFDAVENGIQVSKLMQ
IFSKQAAMIDALISHFTDQIRNKKQEGNTQEPFHDEPNPIQNNGNGVLCN
KLSRLTLATFDEEGGRCIGQMGSLSISYASFLDH

BO29186.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:13:11
Subject Length Description Subject Range Query Range Score Percent Strand
Bili-PH 828 CG11848-PH 1..828 1..828 4387 100 Plus
Bili-PG 828 CG11848-PG 1..828 1..828 4387 100 Plus
Bili-PF 828 CG11848-PF 1..828 1..828 4387 100 Plus
Bili-PE 828 CG11848-PE 1..828 1..828 4387 100 Plus
Bili-PD 828 CG11848-PD 1..828 1..828 4387 100 Plus