BO29186.complete Sequence
2518 bp assembled on 2011-09-21
GenBank Submission: KX795464
> BO29186.complete
GAAGTTATCAGTCGACATGGAGCCAAATCATTATTACTGCCGGAGCGCCA
TGCAGCAGAATCCCTCGACTTCCATTCCCCAACATGCGTCGAACAAACTC
AACTATGGGATGAACGCTGGCCAGGATTATGTGACATGTAGCTCCGGCCA
ATCGCAATCGGGCTACAGCTCCAAGGACTTGGTTCCGCGCAGTGGGAACA
GCAAAACGCTCGGCGGGAATGGCAACATGGGGAGTCCGTACGGAGGATCT
GTGTGCAGCAACAGTGGCCAATGCAGCAAGAATACTGCCAACGCTGGGAA
CTATATCAACATAATGACTGTTCCACTGGGAACACTGCAGTATAATCGAA
AAAAGCTATCTACACAAGACTACGAATCGCATTTATATTACAACACTACG
GATGTGAAGTGTCGCGATGATTACTATATAGCCAACAATGCCGCAGCAGC
AATACCGCAGCACCAAGCTCATCAACCGCATCAGCAGCCGCATCAGCACC
AACATCCGCAGCATCAGCAGCAGCATCAGCAACACCAGCAACACCAACAG
CACCAGCAACATCAGCAACATCTGCACCAGCAGCAGCAGCAACAGGCAAA
CTTTCTCCACATCCAACAATCGCTACAACACAACCACCAATTGAGCCACC
CAGAACCAATCCATCAGTTGCCCCAATTACAGGGCACGGTGGCCGATCCA
CCAGATGCCTTCGACAACTGTGCGATCTTCCCGAGCGCCGGCGGCAGCAG
CAACGGAAGTGGACGCGTGGCAGCCACTCAAACCCATCAGAACCCATCCG
GTGTGGTCACGTGCGACCAGCAGGTACCCGTGTCCCTGGGCTCGGTGAAT
ATGCCCGTTCCCCCAATCATGTATACCGTGCATCGTGTGGTGACCACAGC
TCAGATCCAAACGGCAGCGGGCAGCACCTTCGCCTCGTCGGCTAGTGTGT
CCAGTGTGGTCAGCACTGGCCAGAATGATGGTGACTGCCTGTCGCCGGCA
CAGGTGTCCTCCGCCATGGCCGCCTCTGGAAATGCTTCCTGTCTGGGTGG
ATTACCCGACATGGGCGCCAACATGATGAGCAATGCAAGTGCACTTTGTC
CCCTTTCCGACCTGAGGAGCCCATCCGGAGTGCTCACCAATTCCTCATAC
ATGCCACAACATCACAAGTGCAACAATGGGAATGATGCCCAATCCAATCC
CGCAATCCAAAAACGCCTGATGGCGACCAGCTCAACTTCGAACTTCGCGA
CTGCCGGCAAAGCTGCTTCCAATTTAACCCGTGCTCTCCAAAATGTGATC
CCCACATGCGTGTATCTTATGTCCCGGGTGGCGGTGCACATGGAGATCGA
GGGCACTGCCCAGTGTCCATCGCAAGTGATGTTGGCAGCCGCCTTGGGAT
GCGAGGAGCTGGGCATATCCAATAAGTTGCTGGCACAGAGCGTGTTCGGA
TTGTGGATGACAAGTGCTTTACTGGAGATGCAGCTGAAGGCCCACCACTG
CCCCTACATAGTGCGAGTTGCGTGGCCCAATCTCCTCCAGAAGTTCAGCA
ACAGCAGTCCCAGTGATCGAAAGTTCGATGAGCCCATGATAGTTTTGAAG
CGGAATGTCTTCTTCTCGAAGCGAGATGAGGAGAAAATAAAGGATCATCG
GATCTTGGAGCTCCTCTATGAAGAGGCCAGAAACAATGTGCTGACAGGCA
GATATATCATGGAGCCGGTGCATTCGCTAATGTTGGGTGGCATTCAAGCG
CGCATCGAACTGGGTCCTTACAACTCCCACACCCATACAATAGGATTCTT
TCGGGAGAACCAAGCTAGATTTTTGCCTCCTCACGTGGCCAAGAGCTCCA
CTTGGCTGTGGCTACCGATCAGTCAGAAGAATTCTGCGGAAGTGAAGCTT
CTGGAGCAATTCAAGCGAGTGCCCCAGACGGCCACCACACGAAAGTTGAT
GAGGAAATACCTGGAATTCTGCTGGGCTCTGCCATTCTATGGCGCCGCAT
ATTTTCATGGCCAAATAGAACAACCTGTTAGGGGAATTATGGCACTGGTC
AACCAAAAGGACATGGAGGTTTTGGTCGCTGTCAATGAGAGAGGGGTTTT
CGTAATAGATCCGTACGAATGTACCCTCTTGCTGGGATTGCGATACGAGG
ATTTGTCGTGGGATTACGCAAAGCCAAGTGCAAGTGATGATCCCGAATGC
CTCACTTGTATCTTCCTGCAGTTCGATGCCGTCGAGAACGGAATACAAGT
GTCCAAACTGATGCAAATATTTTCAAAGCAAGCTGCCATGATAGACGCAC
TTATATCACACTTTACAGATCAAATCAGAAACAAAAAACAGGAGGGTAAC
ACTCAAGAACCTTTTCACGATGAGCCAAATCCTATTCAAAATAATGGAAA
TGGAGTCTTATGCAATAAGCTGTCTCGATTAACTTTGGCCACCTTCGATG
AAGAGGGAGGTCGTTGCATTGGGCAAATGGGATCATTATCTATAAGCTAT
GCAAGCTTTCTAGACCAT
BO29186.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:37:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Bili-RH | 2487 | CG11848-PH | 1..2484 | 17..2500 | 12420 | 100 | Plus |
Bili-RG | 2487 | CG11848-PG | 1..2484 | 17..2500 | 12420 | 100 | Plus |
Bili-RF | 2487 | CG11848-PF | 1..2484 | 17..2500 | 12420 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:37:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Bili-RH | 4154 | CG11848-RH | 613..3098 | 15..2500 | 12430 | 100 | Plus |
Bili-RG | 3901 | CG11848-RG | 360..2845 | 15..2500 | 12430 | 100 | Plus |
Bili-RF | 3781 | CG11848-RF | 240..2725 | 15..2500 | 12430 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:37:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 25133016..25133768 | 376..1128 | 3765 | 100 | Plus |
Y | 3667352 | Y | 3050664..3051262 | 515..1122 | 2475 | 94.6 | Plus |
3R | 32079331 | 3R | 25132593..25132953 | 15..375 | 1805 | 100 | Plus |
3R | 32079331 | 3R | 25134052..25134399 | 1295..1642 | 1740 | 100 | Plus |
3R | 32079331 | 3R | 25134687..25134880 | 1799..1992 | 955 | 99.5 | Plus |
3R | 32079331 | 3R | 25133829..25133998 | 1127..1296 | 850 | 100 | Plus |
3R | 32079331 | 3R | 25134463..25134625 | 1642..1804 | 815 | 100 | Plus |
3R | 32079331 | 3R | 25135303..25135458 | 2217..2372 | 780 | 100 | Plus |
3R | 32079331 | 3R | 25134946..25135076 | 1992..2122 | 655 | 100 | Plus |
3R | 32079331 | 3R | 25135525..25135653 | 2372..2500 | 645 | 100 | Plus |
Y | 3667352 | Y | 3050518..3050664 | 180..326 | 630 | 95.2 | Plus |
3R | 32079331 | 3R | 25135150..25135248 | 2123..2221 | 495 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:37:49 has no hits.
BO29186.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 14:00:50 Download gff for
BO29186.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Bili-RD | 195..2678 | 17..2502 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:31:09 Download gff for
BO29186.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Bili-RE | 306..2789 | 17..2502 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:22:53 Download gff for
BO29186.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Bili-RF | 242..2725 | 17..2502 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:22:53 Download gff for
BO29186.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 25132595..25132953 | 17..375 | 100 | -> | Plus |
3R | 25133016..25133767 | 376..1127 | 100 | -> | Plus |
3R | 25133830..25133996 | 1128..1294 | 100 | -> | Plus |
3R | 25134052..25134398 | 1295..1641 | 100 | -> | Plus |
3R | 25134463..25134628 | 1642..1807 | 98 | -> | Plus |
3R | 25134696..25134880 | 1808..1992 | 100 | -> | Plus |
3R | 25134947..25135076 | 1993..2122 | 100 | -> | Plus |
3R | 25135150..25135248 | 2123..2221 | 100 | -> | Plus |
3R | 25135308..25135458 | 2222..2372 | 100 | -> | Plus |
3R | 25135526..25135653 | 2373..2502 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:31:09 Download gff for
BO29186.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 20960669..20960798 | 1993..2122 | 100 | -> | Plus |
arm_3R | 20960872..20960970 | 2123..2221 | 100 | -> | Plus |
arm_3R | 20961030..20961180 | 2222..2372 | 100 | -> | Plus |
arm_3R | 20961248..20961375 | 2373..2502 | 98 | | Plus |
arm_3R | 20958317..20958675 | 17..375 | 100 | -> | Plus |
arm_3R | 20958738..20959489 | 376..1127 | 100 | -> | Plus |
arm_3R | 20959552..20959718 | 1128..1294 | 100 | -> | Plus |
arm_3R | 20959774..20960120 | 1295..1641 | 100 | -> | Plus |
arm_3R | 20960185..20960350 | 1642..1807 | 98 | -> | Plus |
arm_3R | 20960418..20960602 | 1808..1992 | 100 | -> | Plus |
BO29186.pep Sequence
Translation from 16 to 2518
> BO29186.pep
MEPNHYYCRSAMQQNPSTSIPQHASNKLNYGMNAGQDYVTCSSGQSQSGY
SSKDLVPRSGNSKTLGGNGNMGSPYGGSVCSNSGQCSKNTANAGNYINIM
TVPLGTLQYNRKKLSTQDYESHLYYNTTDVKCRDDYYIANNAAAAIPQHQ
AHQPHQQPHQHQHPQHQQQHQQHQQHQQHQQHQQHLHQQQQQQANFLHIQ
QSLQHNHQLSHPEPIHQLPQLQGTVADPPDAFDNCAIFPSAGGSSNGSGR
VAATQTHQNPSGVVTCDQQVPVSLGSVNMPVPPIMYTVHRVVTTAQIQTA
AGSTFASSASVSSVVSTGQNDGDCLSPAQVSSAMAASGNASCLGGLPDMG
ANMMSNASALCPLSDLRSPSGVLTNSSYMPQHHKCNNGNDAQSNPAIQKR
LMATSSTSNFATAGKAASNLTRALQNVIPTCVYLMSRVAVHMEIEGTAQC
PSQVMLAAALGCEELGISNKLLAQSVFGLWMTSALLEMQLKAHHCPYIVR
VAWPNLLQKFSNSSPSDRKFDEPMIVLKRNVFFSKRDEEKIKDHRILELL
YEEARNNVLTGRYIMEPVHSLMLGGIQARIELGPYNSHTHTIGFFRENQA
RFLPPHVAKSSTWLWLPISQKNSAEVKLLEQFKRVPQTATTRKLMRKYLE
FCWALPFYGAAYFHGQIEQPVRGIMALVNQKDMEVLVAVNERGVFVIDPY
ECTLLLGLRYEDLSWDYAKPSASDDPECLTCIFLQFDAVENGIQVSKLMQ
IFSKQAAMIDALISHFTDQIRNKKQEGNTQEPFHDEPNPIQNNGNGVLCN
KLSRLTLATFDEEGGRCIGQMGSLSISYASFLDH
BO29186.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:13:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Bili-PH | 828 | CG11848-PH | 1..828 | 1..828 | 4387 | 100 | Plus |
Bili-PG | 828 | CG11848-PG | 1..828 | 1..828 | 4387 | 100 | Plus |
Bili-PF | 828 | CG11848-PF | 1..828 | 1..828 | 4387 | 100 | Plus |
Bili-PE | 828 | CG11848-PE | 1..828 | 1..828 | 4387 | 100 | Plus |
Bili-PD | 828 | CG11848-PD | 1..828 | 1..828 | 4387 | 100 | Plus |