BO29188.complete Sequence
1354 bp assembled on 2011-08-26
GenBank Submission: KX798981
> BO29188.complete
GAAGTTATCAGTCGACATGCAGCTCCTGGTCGTGGCCCTGGTGGCGGTGG
CCATCGCGTCCTTGCCCCAACTGGCCGCAGGTAAAAAGCTGGGGAAGCGC
TGCGTGAACTGCACGTACCGCACTTACTACACCTACGGCGATGGGCGATC
CCTGCAGCGGGTTGTCTATAGAGATCCGGTCTACACACGTGCGCAGTCCT
ACGCGAGCGGATGCAGCGGTAGCCCGTGCGGCGTGAACGCCGTGTGCCAG
GAGGCCTCCGGAGGACGGCCCGTCTGCTCGTGCCCGCCCGGATTCAGCGG
TAATCCGCTCACCCACTGCAATCGCGGCGAGTGCCTGGACAACGTCGACT
GTCGCGACAACCTGCAGTGCAAGGACAATCGCTGCGTTAATCCCTGCGTG
GGTGCCTGTGGCATTGGCTCCAATTGTGACGCCCGCAACCACGTGGCCGT
GTGCAGCTGCCCCGCCGGCTACAATGGCGACCCATACCACGCCTGCCACC
TCAACGATCCGGAGGAGCAGTGCCATCCCAGTCCGTGCGGCGTTAACACC
AAGTGCGAGATCATCAACGGCGTGCCCACCTGCTCATGCGTTCACGGCTA
TGTGGGCAATCCGCTGAGCGGCTGTCGCCACGAGTGCGATCACGATGGCG
ACTGCAGCAGCCGGGACATGTGCTCCAGCAACTTCAAGTGCGTGCCGGCA
TGCGGGCAGTGCGGCACTGGCGCCACCTGCCGAACGGTCAGCAATCACCG
GGCTGTCTGCGAGTGCCCCAAGGGCTACATTGGCAGCCCGTACACGGAGT
GCCGACCGGAGTGCTATGGCGATGCCGACTGCCCGGCCGGGCGACCCGCC
TGCTTCTACGGCATCTGCAAGAACACCTGCGAGGGTGCCTGCGGCATCGG
CGCCGACTGCAACCTGCGCGGCCTCACACCCGTCTGCAGCTGCCCCCGCG
ACATGACCGGCGATCCCTTCGTGCGCTGCCGTCCCTTCACCAAGGAGGAC
CTTTGCGACCCCAATCCGTGCGGCACCAACGCCATCTGCGTGCCCGGACA
CGACAACACCGGCCGCGAGCGGCCCGTCTGCAACTGCCTGCCCGGCCACA
CCGGCAATCCGCTGAGCCACTGCACCCGGGGTGAGTGCCTGAGCAACAAC
GAGTGCCCCGACCATCGCGCCTGCATCAACTACCAGTGCATCGATCCCTG
CATCGGCAAGTGTGCCACTGGAGCCAGCTGCGAGCCCAAGGCCCACCTGG
CTGTCTGCCGCTGTCCACAGGGACAGTCGGGCGACGCCCTGGTGTCCTGT
CGCCAGACGCGCACCTTTCCCGTGGCCAAGTACCACGCAAGCTTTCTAGA
CCAT
BO29188.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:48:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9572-RB | 1323 | CG9572-PB | 1..1320 | 17..1336 | 6600 | 100 | Plus |
CG9572-RA | 1326 | CG9572-PA | 6..1323 | 19..1336 | 6590 | 100 | Plus |
CG9572-RD | 1215 | CG9572-PD | 67..1212 | 191..1336 | 5730 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:48:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9572-RB | 1664 | CG9572-RB | 136..1455 | 17..1336 | 6600 | 100 | Plus |
CG9572-RA | 1667 | CG9572-RA | 141..1458 | 19..1336 | 6590 | 100 | Plus |
CG9572-RD | 1556 | CG9572-RD | 202..1347 | 191..1336 | 5730 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:48:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 20154197..20154815 | 512..1130 | 3095 | 100 | Plus |
X | 23542271 | X | 20150597..20150837 | 191..431 | 1205 | 100 | Plus |
X | 23542271 | X | 20155098..20155305 | 1129..1336 | 1040 | 100 | Plus |
X | 23542271 | X | 20150064..20150236 | 19..191 | 865 | 100 | Plus |
X | 23542271 | X | 20150945..20151026 | 431..512 | 410 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:48:31 has no hits.
BO29188.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-26 13:54:51 Download gff for
BO29188.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9572-RB | 134..1453 | 17..1338 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:34:45 Download gff for
BO29188.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9572-RB | 136..1455 | 17..1338 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:10:16 Download gff for
BO29188.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9572-RB | 136..1455 | 17..1338 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:10:16 Download gff for
BO29188.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20150063..20150236 | 17..191 | 99 | -> | Plus |
X | 20150598..20150836 | 192..430 | 100 | -> | Plus |
X | 20150945..20151026 | 431..512 | 100 | -> | Plus |
X | 20154198..20154814 | 513..1129 | 100 | -> | Plus |
X | 20155099..20155305 | 1130..1338 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:34:45 Download gff for
BO29188.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20044096..20044269 | 17..191 | 99 | -> | Plus |
arm_X | 20044631..20044869 | 192..430 | 100 | -> | Plus |
arm_X | 20044978..20045059 | 431..512 | 100 | -> | Plus |
arm_X | 20048231..20048847 | 513..1129 | 100 | -> | Plus |
arm_X | 20049132..20049338 | 1130..1338 | 99 | | Plus |
BO29188.pep Sequence
Translation from 16 to 1354
> BO29188.pep
MQLLVVALVAVAIASLPQLAAGKKLGKRCVNCTYRTYYTYGDGRSLQRVV
YRDPVYTRAQSYASGCSGSPCGVNAVCQEASGGRPVCSCPPGFSGNPLTH
CNRGECLDNVDCRDNLQCKDNRCVNPCVGACGIGSNCDARNHVAVCSCPA
GYNGDPYHACHLNDPEEQCHPSPCGVNTKCEIINGVPTCSCVHGYVGNPL
SGCRHECDHDGDCSSRDMCSSNFKCVPACGQCGTGATCRTVSNHRAVCEC
PKGYIGSPYTECRPECYGDADCPAGRPACFYGICKNTCEGACGIGADCNL
RGLTPVCSCPRDMTGDPFVRCRPFTKEDLCDPNPCGTNAICVPGHDNTGR
ERPVCNCLPGHTGNPLSHCTRGECLSNNECPDHRACINYQCIDPCIGKCA
TGASCEPKAHLAVCRCPQGQSGDALVSCRQTRTFPVAKYHASFLDH
BO29188.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:59:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9572-PB | 440 | CG9572-PB | 1..440 | 1..440 | 2574 | 100 | Plus |
CG9572-PA | 441 | CG9572-PA | 3..441 | 2..440 | 2569 | 100 | Plus |
CG9572-PD | 404 | CG9572-PD | 3..404 | 2..440 | 2314 | 91.6 | Plus |
dp-PZ | 15998 | CG33196-PZ | 13030..13462 | 51..435 | 801 | 37.9 | Plus |
dp-PY | 18095 | CG33196-PY | 15140..15559 | 66..435 | 799 | 38.1 | Plus |
dp-PZ | 15998 | CG33196-PZ | 5698..6119 | 63..435 | 778 | 36.8 | Plus |
dp-PZ | 15998 | CG33196-PZ | 12402..12824 | 66..436 | 774 | 36.6 | Plus |
dp-PZ | 15998 | CG33196-PZ | 6553..6970 | 66..428 | 769 | 37.7 | Plus |
dp-PZ | 15998 | CG33196-PZ | 8577..8992 | 66..429 | 765 | 36.8 | Plus |
dp-PZ | 15998 | CG33196-PZ | 11126..11538 | 66..428 | 764 | 35.2 | Plus |
dp-PZ | 15998 | CG33196-PZ | 6237..6645 | 66..429 | 758 | 36.3 | Plus |
dp-PZ | 15998 | CG33196-PZ | 9852..10265 | 66..431 | 757 | 37 | Plus |
dp-PZ | 15998 | CG33196-PZ | 7938..8353 | 66..428 | 753 | 35 | Plus |
dp-PZ | 15998 | CG33196-PZ | 12727..13144 | 66..437 | 747 | 37.2 | Plus |
dp-PZ | 15998 | CG33196-PZ | 13471..13890 | 66..432 | 744 | 36.3 | Plus |
dp-PZ | 15998 | CG33196-PZ | 4946..5369 | 66..436 | 742 | 36.1 | Plus |
dp-PZ | 15998 | CG33196-PZ | 7198..7609 | 66..428 | 742 | 37.2 | Plus |
dp-PZ | 15998 | CG33196-PZ | 9071..9521 | 29..428 | 741 | 36 | Plus |
dp-PZ | 15998 | CG33196-PZ | 8903..9319 | 66..442 | 739 | 34.6 | Plus |
dp-PZ | 15998 | CG33196-PZ | 13367..13787 | 66..435 | 732 | 36.8 | Plus |
dp-PZ | 15998 | CG33196-PZ | 7300..7723 | 66..438 | 731 | 33.9 | Plus |
dp-PZ | 15998 | CG33196-PZ | 11450..11857 | 66..429 | 731 | 35.4 | Plus |
dp-PZ | 15998 | CG33196-PZ | 13144..13562 | 59..428 | 730 | 36.5 | Plus |
dp-PZ | 15998 | CG33196-PZ | 8157..8564 | 66..429 | 728 | 35.5 | Plus |
dp-PZ | 15998 | CG33196-PZ | 4094..4519 | 66..440 | 726 | 34.9 | Plus |
dp-PZ | 15998 | CG33196-PZ | 7377..7824 | 31..435 | 725 | 34.7 | Plus |
dp-PZ | 15998 | CG33196-PZ | 9291..9740 | 32..436 | 725 | 34.6 | Plus |
dp-PZ | 15998 | CG33196-PZ | 5375..5800 | 66..435 | 724 | 34.2 | Plus |
dp-PZ | 15998 | CG33196-PZ | 10909..11323 | 62..428 | 724 | 35.5 | Plus |
dp-PZ | 15998 | CG33196-PZ | 8784..9206 | 55..435 | 720 | 36.1 | Plus |
dp-PZ | 15998 | CG33196-PZ | 9430..9842 | 66..432 | 720 | 36.3 | Plus |
dp-PZ | 15998 | CG33196-PZ | 10382..10796 | 66..428 | 719 | 36.4 | Plus |
dp-PZ | 15998 | CG33196-PZ | 6085..6540 | 19..428 | 717 | 33.7 | Plus |
dp-PZ | 15998 | CG33196-PZ | 7832..8249 | 66..429 | 717 | 35 | Plus |
dp-PZ | 15998 | CG33196-PZ | 4497..4932 | 42..428 | 713 | 34.4 | Plus |
dp-PZ | 15998 | CG33196-PZ | 7627..8030 | 66..428 | 713 | 35.2 | Plus |
dp-PZ | 15998 | CG33196-PZ | 4841..5258 | 66..435 | 712 | 35.7 | Plus |
dp-PZ | 15998 | CG33196-PZ | 5594..6005 | 66..428 | 712 | 37 | Plus |
dp-PZ | 15998 | CG33196-PZ | 5908..6328 | 60..428 | 711 | 36.9 | Plus |
dp-PZ | 15998 | CG33196-PZ | 8016..8463 | 32..436 | 711 | 34.1 | Plus |
dp-PZ | 15998 | CG33196-PZ | 11342..11751 | 66..430 | 709 | 36.4 | Plus |
dp-PZ | 15998 | CG33196-PZ | 10174..10580 | 66..430 | 708 | 34.8 | Plus |
dp-PZ | 15998 | CG33196-PZ | 12076..12498 | 54..432 | 706 | 33.8 | Plus |
dp-PZ | 15998 | CG33196-PZ | 9540..9944 | 66..428 | 703 | 34.7 | Plus |
dp-PZ | 15998 | CG33196-PZ | 10274..10684 | 66..428 | 700 | 36 | Plus |
dp-PZ | 15998 | CG33196-PZ | 10486..10901 | 66..428 | 698 | 35 | Plus |
dp-PZ | 15998 | CG33196-PZ | 5270..5695 | 66..436 | 697 | 35.7 | Plus |
dp-PZ | 15998 | CG33196-PZ | 5476..5897 | 51..428 | 696 | 34.5 | Plus |
dp-PZ | 15998 | CG33196-PZ | 13793..14171 | 66..435 | 695 | 37.7 | Plus |
dp-PZ | 15998 | CG33196-PZ | 6986..7394 | 66..430 | 694 | 35.1 | Plus |
dp-PZ | 15998 | CG33196-PZ | 12496..12923 | 50..430 | 693 | 36 | Plus |
dp-PZ | 15998 | CG33196-PZ | 6648..7075 | 54..429 | 692 | 34 | Plus |
dp-PZ | 15998 | CG33196-PZ | 6757..7179 | 54..428 | 692 | 35.3 | Plus |
dp-PZ | 15998 | CG33196-PZ | 5052..5467 | 66..428 | 685 | 33.9 | Plus |