Clone BO29192 Report

Search the DGRC for BO29192

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:291
Well:92
Vector:pDNR-Dual
Associated Gene/Transcriptras-RA
Protein status:BO29192.pep: Imported from assembly
Sequenced Size:1645

Clone Sequence Records

BO29192.complete Sequence

1645 bp assembled on 2011-09-19

GenBank Submission: KX799201

> BO29192.complete
GAAGTTATCAGTCGACATGGAGAGCACGACAAAGGTGAAGGTGAACGGCT
TTGTGGAATCGACGTCGTCTTCAGCGGCGCCGGCAATCCAGACAAAGAGT
ACCACCGGATTCGATGCCGAGCTGCAGGATGGGCTGAGTTGTAAGGAACT
GTTCCAGAACGGTGAGGGACTCACCTACAACGACTTTCTCATACTGCCCG
GCTACATAGACTTCACCGCCGAGGAGGTCGATCTCAGTTCGCCACTGACC
AAGTCGCTGACATTGCGAGCACCGCTGGTTAGTTCGCCCATGGACACGGT
AACCGAATCGGAGATGGCCATCGCCATGGCGCTGTGTGGTGGCATTGGCA
TCATCCATCACAACTGCACGCCGGAATACCAGGCGTTGGAGGTGCACAAG
GTTAAGAAGTACAAGCACGGCTTCATGCGCGACCCCTCGGTGATGTCGCC
CACGAATACGGTGGGGGATGTGTTGGAGGCGCGGCGGAAGAACGGATTCA
CCGGCTATCCGGTCACCGAGAACGGCAAACTTGGCGGCAAGCTGCTGGGC
ATGGTCACGTCGCGAGACATTGACTTCCGCGAGAACCAGCCGGAGGTCCT
GCTGGCCGACATCATGACCACCGAACTGGTCACCGCTCCCAATGGCATCA
ATCTGCCCACGGCAAACGCTATTCTCGAGAAGAGCAAGAAGGGCAAACTG
CCGATTGTGAATCAGGCCGGCGAACTGGTGGCCATGATTGCCCGCACGGA
TTTGAAGAAGGCCCGCTCCTACCCGAATGCCTCCAAGGACTCCAATAAGC
AGCTCCTCGTCGGCGCTGCCATCGGAACGCGATCGGAGGACAAGGCGCGC
CTGGCTCTGCTGGTGGCCAACGGCGTGGACGTTATCATCCTTGATTCATC
GCAGGGCAACTCCGTCTACCAGGTGGAGATGATCAAGTACATTAAGGAGA
CCTATCCCGAACTACAGGTCATTGGTGGCAATGTGGTAACACGTGCCCAG
GCCAAAAATCTCATTGATGCCGGCGTCGATGGACTGCGTGTGGGCATGGG
TTCCGGTTCCATCTGCATCACCCAGGAGGTGATGGCCTGCGGATGTCCTC
AGGCCACTGCTGTCTACCAGGTGTCCACGTACGCTCGCCAATTCGGAGTG
CCAGTGATCGCGGACGGAGGCATCCAGTCCATTGGACACATTGTGAAGGC
TATTGCATTGGGAGCCAGCGCTGTAATGATGGGCTCCCTGCTGGCGGGCA
CATCGGAGGCACCGGGCGAGTACTTCTTCTCCGACGGAGTGCGCCTTAAG
AAGTACCGCGGCATGGGCTCCCTGGAGGCCATGGAGCGCGGCGATGCCAA
GGGCGCTGCCATGTCGCGCTACTACCACAACGAGATGGATAAAATGAAGG
TGGCACAGGGCGTCAGTGGCAGCATCGTGGACAAGGGCAGTGTGCTGCGC
TATCTACCCTATTTGGAGTGCGGACTGCAGCACAGTTGTCAGGACATCGG
TGCTAACTCCATTAATAAATTGAGGGATATGATCTATAATGGCCAACTGC
GCTTCATGAAGCGCACCCATTCCGCTCAACTGGAAGGCAATGTCCATGGC
CTCTTCAGCTACGAGAAGCGTCTCTTCGCAAGCTTTCTAGACCAT

BO29192.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:35:40
Subject Length Description Subject Range Query Range Score Percent Strand
ras-RD 1614 CG1799-PD 1..1611 17..1627 8055 100 Plus
ras-RE 1614 CG1799-PE 1..1611 17..1627 8055 100 Plus
ras-RA 1614 CG1799-PA 1..1611 17..1627 8055 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:35:41
Subject Length Description Subject Range Query Range Score Percent Strand
ras-RD 2810 CG1799-RD 303..1913 17..1627 8055 100 Plus
ras-RE 2415 CG1799-RE 199..1809 17..1627 8055 100 Plus
ras-RA 2519 CG1799-RA 303..1913 17..1627 8055 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:35:38
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10746420..10747072 331..983 3265 100 Plus
X 23542271 X 10747485..10748027 983..1525 2715 100 Plus
X 23542271 X 10745820..10745983 17..180 820 100 Plus
X 23542271 X 10746072..10746226 177..331 760 99.4 Plus
X 23542271 X 10748096..10748200 1523..1627 525 100 Plus
Blast to na_te.dros performed on 2014-11-27 08:35:39 has no hits.

BO29192.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-19 10:42:58 Download gff for BO29192.complete
Subject Subject Range Query Range Percent Splice Strand
ras-RA 1010..2620 17..1629 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:12:02 Download gff for BO29192.complete
Subject Subject Range Query Range Percent Splice Strand
ras-RC 105..1715 17..1629 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:22:47 Download gff for BO29192.complete
Subject Subject Range Query Range Percent Splice Strand
ras-RA 303..1913 17..1629 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:22:47 Download gff for BO29192.complete
Subject Subject Range Query Range Percent Splice Strand
X 10745820..10745983 17..180 100 -> Plus
X 10746076..10746226 181..331 100 -> Plus
X 10746421..10747072 332..983 100 -> Plus
X 10747486..10748026 984..1524 100 -> Plus
X 10748098..10748200 1525..1629 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:12:02 Download gff for BO29192.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 10639853..10640016 17..180 100 -> Plus
arm_X 10640109..10640259 181..331 100 -> Plus
arm_X 10640454..10641105 332..983 100 -> Plus
arm_X 10641519..10642059 984..1524 100 -> Plus
arm_X 10642131..10642233 1525..1629 98   Plus

BO29192.pep Sequence

Translation from 16 to 1645

> BO29192.pep
MESTTKVKVNGFVESTSSSAAPAIQTKSTTGFDAELQDGLSCKELFQNGE
GLTYNDFLILPGYIDFTAEEVDLSSPLTKSLTLRAPLVSSPMDTVTESEM
AIAMALCGGIGIIHHNCTPEYQALEVHKVKKYKHGFMRDPSVMSPTNTVG
DVLEARRKNGFTGYPVTENGKLGGKLLGMVTSRDIDFRENQPEVLLADIM
TTELVTAPNGINLPTANAILEKSKKGKLPIVNQAGELVAMIARTDLKKAR
SYPNASKDSNKQLLVGAAIGTRSEDKARLALLVANGVDVIILDSSQGNSV
YQVEMIKYIKETYPELQVIGGNVVTRAQAKNLIDAGVDGLRVGMGSGSIC
ITQEVMACGCPQATAVYQVSTYARQFGVPVIADGGIQSIGHIVKAIALGA
SAVMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMERGDAKGAAMS
RYYHNEMDKMKVAQGVSGSIVDKGSVLRYLPYLECGLQHSCQDIGANSIN
KLRDMIYNGQLRFMKRTHSAQLEGNVHGLFSYEKRLFASFLDH

BO29192.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:04:50
Subject Length Description Subject Range Query Range Score Percent Strand
ras-PD 537 CG1799-PD 1..537 1..537 2728 100 Plus
ras-PE 537 CG1799-PE 1..537 1..537 2728 100 Plus
ras-PA 537 CG1799-PA 1..537 1..537 2728 100 Plus
ras-PC 537 CG1799-PC 1..537 1..537 2728 100 Plus