Clone BO29204 Report

Search the DGRC for BO29204

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:292
Well:4
Vector:pDNR-Dual
Associated Gene/TranscriptCG17283-RA
Protein status:BO29204.pep: Imported from assembly
Sequenced Size:1429

Clone Sequence Records

BO29204.complete Sequence

1429 bp assembled on 2011-10-18

GenBank Submission: KX799723

> BO29204.complete
GAAGTTATCAGTCGACATGCGGTGCAGGATCTTGGTGCTGTGTGCATTCA
TATGCCTCCTTGTAATTTTGACCGAGGCCAGGCAGAGGAAAGTTAACCAT
TCCGCTGATAGAAGATCATTGGCAGTCAGAAGTGGACACAGGAATGAGCG
GAGTAGTGCTCTTCATGGAAGAGGATTGGCTGCACGATCAAGGAATCAAA
GGAAACGCAGATTAAATGCTGCCAAGAGAAGCAGGAGGAAGCGTAACTTG
GCTAGAAAGTCAAATCGGAAAATTAGGGCCAAGACCGAGTCAATCGTTAG
AAGTGATTCTAGTTACGCTACTTTACCATTGGACTTCCAACAGAACTTCG
TGCGAACCACCGACAACCTGCGATCGGAGAAGGCCTTTTTGGCCAATCGA
TATGGCTTTAGTTTTGCCAAAAGTTCTGGAACGGCTACTTTGAAAAACAC
GGCGAACATGGAGTATACCTGCAAAATGAACATTGGTACACCCAAGCAGA
AGTTCACAGTTCTTCCGGACACCGGAAGTTCGAATATTTGGGTGCCAGGA
CCGCATTGCAAGAGTAAGGCCTGCAAGAAACACAAACAATATCATCCGGC
CAAGTCAAGTACCTATGTTAAGAATGGGAAATCCTTTGCCATCACCTACG
GTTCGGGTAGTGTGGCAGGAGTTCTGGCCAAGGATACGGTGAGAATAGCT
GGGCTGGTTGTGACCAATCAAACTTTCGCCATGACCACCAAGGAACCGGG
AACCACTTTCGTGACCTCAAATTTCGATGGTATACTAGGGCTGGGATATC
GATCCATAGCGGTGGACAATGTGAAGACCCTGGTGCAGAATATGTGCTCG
GAGGATGTGATCACCAGTTGCAAGTTTGCCATTTGCATGAAGGGCGGCGG
CAGTTCCTCTCGAGGTGGTGCAATAATCTTCGGCAGCTCCAATACAAGTG
CTTATAGCGGATCCAATAGCTACACATACACTCCGGTGACCAAAAAGGGT
TACTGGCAGTTCACTCTGCAGGACATTTACGTGGGCGGCACCAAAGTGAG
CGGCTCGGTGCAGGCCATTGTGGATTCCGGAACTTCATTGATCACAGCTC
CGACGGCCATCTACAACAAGATCAACAAGGTCATCGGATGCAGGGCTACC
TCCAGCGGAGAGTGTTGGATGAAGTGCGCCAAGAAAATACCCGACTTCAC
CTTTGTCATCGCGGGCAAGAAGTTCGTCGTCAAGGGTAACAAAATGAAAT
TAAAGGTGAGGACCAACAGAGGCAGGACAGTCTGCATATCGGCGGTAACT
GAAGTTCCCGACGAGCCAGTGATCCTGGGCGATGCCTTCATCCGGCATTT
CTGCACGGAATTCGACTTGGCCAACAATCGCATTGGATTCGCTGCCACTA
CGTATTCCACTGCAAGCTTTCTAGACCAT

BO29204.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:16:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG17283-RA 1398 CG17283-PA 1..1395 17..1411 6975 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:16:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG17283-RA 1585 CG17283-RA 6..1401 16..1411 6980 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:16:40
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 17407881..17409276 16..1411 6980 100 Plus
Blast to na_te.dros performed on 2014-11-26 22:16:40 has no hits.

BO29204.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-10-18 10:25:33 Download gff for BO29204.complete
Subject Subject Range Query Range Percent Splice Strand
CG17283-RA 1..1395 17..1413 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:52:45 Download gff for BO29204.complete
Subject Subject Range Query Range Percent Splice Strand
CG17283-RA 7..1401 17..1413 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:56:17 Download gff for BO29204.complete
Subject Subject Range Query Range Percent Splice Strand
CG17283-RA 7..1401 17..1413 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:56:17 Download gff for BO29204.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17407882..17409276 17..1413 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:52:45 Download gff for BO29204.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 13233604..13234998 17..1413 99   Plus

BO29204.pep Sequence

Translation from 16 to 1429

> BO29204.pep
MRCRILVLCAFICLLVILTEARQRKVNHSADRRSLAVRSGHRNERSSALH
GRGLAARSRNQRKRRLNAAKRSRRKRNLARKSNRKIRAKTESIVRSDSSY
ATLPLDFQQNFVRTTDNLRSEKAFLANRYGFSFAKSSGTATLKNTANMEY
TCKMNIGTPKQKFTVLPDTGSSNIWVPGPHCKSKACKKHKQYHPAKSSTY
VKNGKSFAITYGSGSVAGVLAKDTVRIAGLVVTNQTFAMTTKEPGTTFVT
SNFDGILGLGYRSIAVDNVKTLVQNMCSEDVITSCKFAICMKGGGSSSRG
GAIIFGSSNTSAYSGSNSYTYTPVTKKGYWQFTLQDIYVGGTKVSGSVQA
IVDSGTSLITAPTAIYNKINKVIGCRATSSGECWMKCAKKIPDFTFVIAG
KKFVVKGNKMKLKVRTNRGRTVCISAVTEVPDEPVILGDAFIRHFCTEFD
LANNRIGFAATTYSTASFLDH

BO29204.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:35:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG17283-PA 465 CG17283-PA 1..465 1..465 2400 100 Plus
Bace-PB 372 CG13095-PB 22..369 103..459 741 43.4 Plus
Bace-PA 372 CG13095-PA 22..369 103..459 741 43.4 Plus
CG5863-PA 395 CG5863-PA 28..392 103..459 734 41.1 Plus
CG17134-PA 391 CG17134-PA 25..386 105..459 693 42.9 Plus