BO29205.complete Sequence
958 bp assembled on 2011-09-14
GenBank Submission: KX796010
> BO29205.complete
GAAGTTATCAGTCGACATGTTCTGTGCCCTATCAGCATTCCTCACATTCG
TTGGTGTCTATGCCCTGTCCTCTTATCTCTACGAGCAGTTAAGAACGCCG
TACAAATTAATCAAAATCAGGTATTTCAGTGGGACTAGGCCAACTCTGAA
GGAGCGTTTCGGAGATTGGGCCGCTGTCACGGGTGCCAGCGATGGAATTG
GCAAGGAATATGCCAAGGAGCTGGCCCGCCAGAACATCAATGTGGTCCTA
ATCGCTAGAACCGAGGAGAAACTCCAGGCGGTTGCCAAGGAAATCGCGGA
TTGCGGTGCCGGTGTTCAGACCAAAATAGTGATAGCTGATTTTACCAAGG
GCTCGCAGGTCTATGAGCACATAGAAAAGGAAACTGCCAATATACCCATT
TCCATACTTGTAAACAACGTTGGAATCGCCACGCCGAAATCCTTGCTGAA
ATATAACCAGGAAGAAACGCAAAACATCATCGACACCAACGTGGTGGCCG
TTTCCCAGCTGTCTCGCATCTTCTTCCAGCGCATGAAGGCGTCTAAATTG
AAGGGAGCCATTGTGAATGTTGGTTCCGGCACGGAACTGCAGCCACTTCC
CAATGGAGCCTACTATGCCGCCTCCAAGGCGTACACCCGTAGTTTAACCC
TGGCCTTGTACCACGAGGCGAAGCCTTATGGCATCCATGTGCAGATGTTG
TCCCCGAACTTTGTGGTTACCAAAATCAACTCGTACTCCAGGCAGATCAT
GAAGGGTGGTCTCCTAATCCCATCGGCGTCGGCTTATGCCAAGAGTGCGG
TTAATCAGCTGCGGGACGAAGTGGACGAGACTCCTGGTTACCTGTGGCAC
CATGTCCAAAACGCTGTGGCCACCGCCTTCACCTGGCGAGTGCGAACCTA
TGTCGCCTGTAAATTGTTCAACAAAATATCCGACAATATAGCAAGCTTTC
TAGACCAT
BO29205.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:31:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6012-RA | 927 | CG6012-PA | 1..924 | 17..940 | 4620 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:31:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6012-RA | 1041 | CG6012-RA | 71..994 | 17..940 | 4620 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:31:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16860076..16860606 | 940..410 | 2655 | 100 | Minus |
| 2L | 23513712 | 2L | 16861140..16861419 | 296..17 | 1400 | 100 | Minus |
| 2L | 23513712 | 2L | 16860673..16860787 | 410..296 | 575 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:31:55 has no hits.
BO29205.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-14 12:05:42 Download gff for
BO29205.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6012-RA | 6..924 | 22..942 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:17:17 Download gff for
BO29205.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6012-RA | 76..994 | 22..942 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:12:31 Download gff for
BO29205.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6012-RA | 76..994 | 22..942 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:12:31 Download gff for
BO29205.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16861140..16861414 | 22..296 | 100 | | Minus |
| 2L | 16860072..16860605 | 411..942 | 99 | <- | Minus |
| 2L | 16860673..16860786 | 297..410 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:17:17 Download gff for
BO29205.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16860072..16860605 | 411..942 | 99 | <- | Minus |
| arm_2L | 16860673..16860786 | 297..410 | 100 | <- | Minus |
| arm_2L | 16861140..16861414 | 22..296 | 100 | | Minus |
BO29205.pep Sequence
Translation from 16 to 958
> BO29205.pep
MFCALSAFLTFVGVYALSSYLYEQLRTPYKLIKIRYFSGTRPTLKERFGD
WAAVTGASDGIGKEYAKELARQNINVVLIARTEEKLQAVAKEIADCGAGV
QTKIVIADFTKGSQVYEHIEKETANIPISILVNNVGIATPKSLLKYNQEE
TQNIIDTNVVAVSQLSRIFFQRMKASKLKGAIVNVGSGTELQPLPNGAYY
AASKAYTRSLTLALYHEAKPYGIHVQMLSPNFVVTKINSYSRQIMKGGLL
IPSASAYAKSAVNQLRDEVDETPGYLWHHVQNAVATAFTWRVRTYVACKL
FNKISDNIASFLDH
BO29205.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:18:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6012-PA | 308 | CG6012-PA | 1..308 | 1..308 | 1564 | 100 | Plus |
| CG31809-PC | 316 | CG31809-PC | 7..301 | 12..304 | 612 | 46 | Plus |
| CG31809-PB | 316 | CG31809-PB | 7..301 | 12..304 | 612 | 46 | Plus |
| CG13284-PE | 325 | CG13284-PE | 8..310 | 5..304 | 612 | 45.4 | Plus |
| CG13284-PA | 325 | CG13284-PA | 8..310 | 5..304 | 612 | 45.4 | Plus |
