BO29209.complete Sequence
970 bp assembled on 2011-09-14
GenBank Submission: KX794721
> BO29209.complete
GAAGTTATCAGTCGACATGGGACATTCGTCAAATTTGTTTTGGTTCTTTG
TTTTCGTATTAATCACAAAAGTATACGCCGCATTGTCCAATCCATTGTCA
TCAAAAATCGAAGTATACAATCAGCCTGAAGTTACACCCGAAAAAGAAAG
AGCCAAAGTGAGAAACTATTTCGTGCATGAGCCATACGGGCCCAACACAT
ATTCCTTTGGCTATGAGATTAATGATCCGCAGACGCAAAACTCTCAGTTT
CGAGAAGAAAAAAGATTTGTGAATGGCAGCATTCAAGGTAGCTACGGGTA
TGCAAGGCCAGATGGACGCATTGAAGTCACCAAATATATGGCGAAAGAGG
ATGGCGGTTACTCGGCCCAGATTCAGATTTTTAAAGCAGGCGATGAGAAA
GTCAAATCAGTTTGGCCCACCGAAAGACCTGATATATTAGTGGAGAGAAG
CAAATCCGATGCTCCTTCAAATATCACCTGGGATCCAAAGAGCCATCTCA
ACGTGACCGTCTCTCATGTGGCGGATCATGTGGCCCAGCAGCTGAAGCAG
CAACATGGCCTCGACCTAAACCACATCGATGTGACCAAGGATGTGCTTAA
ACCAGCGGTGCTCGATGTTATCCAGGGCAAGGAACCAACTAAGGGTCGCC
CTGTTCAGAATCTAATTCCTCAGCATTTTCCCATAGTTCCCTTCCAACTG
CCGGCGGATCAAGAAACCACCAAGGCCACCACAGCGGAGCCCCAGAAAAC
TGAAAGTTCAAAATACCACAGGGCGCAATCCAACAATGCCGAGAAGGCTC
AACAAGTCGAGGAGCCGGAGGCAAGATTACCGCCACCCGGGCCACTGGTC
AATAGCAGTCCAAGCGATGGAAATTGGCAACGGCGAACCATTGAGGCAAA
TCGCCGTGAATTCCTGGCCAATTTACCCAACCTAAGTGAGGCCAGGCCAG
AGGCAAGCTTTCTAGACCAT
BO29209.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:32:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34462-RA | 939 | CG34462-PA | 1..936 | 17..952 | 4680 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:32:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34462-RA | 1157 | CG34462-RA | 97..1033 | 16..952 | 4685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:32:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8329349..8330113 | 188..952 | 3825 | 100 | Plus |
| 3L | 28110227 | 3L | 8329160..8329299 | 50..189 | 700 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:32:26 has no hits.
BO29209.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-14 12:05:43 Download gff for
BO29209.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34462-RA | 1..936 | 17..954 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:17:26 Download gff for
BO29209.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34462-RA | 98..1033 | 17..954 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:12:40 Download gff for
BO29209.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34462-RA | 98..1033 | 17..954 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:12:40 Download gff for
BO29209.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8328680..8328712 | 17..49 | 100 | -> | Plus |
| 3L | 8329160..8329298 | 50..188 | 100 | -> | Plus |
| 3L | 8329350..8330113 | 189..954 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:17:26 Download gff for
BO29209.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8321780..8321812 | 17..49 | 100 | -> | Plus |
| arm_3L | 8322260..8322398 | 50..188 | 100 | -> | Plus |
| arm_3L | 8322450..8323213 | 189..954 | 99 | | Plus |
BO29209.pep Sequence
Translation from 16 to 970
> BO29209.pep
MGHSSNLFWFFVFVLITKVYAALSNPLSSKIEVYNQPEVTPEKERAKVRN
YFVHEPYGPNTYSFGYEINDPQTQNSQFREEKRFVNGSIQGSYGYARPDG
RIEVTKYMAKEDGGYSAQIQIFKAGDEKVKSVWPTERPDILVERSKSDAP
SNITWDPKSHLNVTVSHVADHVAQQLKQQHGLDLNHIDVTKDVLKPAVLD
VIQGKEPTKGRPVQNLIPQHFPIVPFQLPADQETTKATTAEPQKTESSKY
HRAQSNNAEKAQQVEEPEARLPPPGPLVNSSPSDGNWQRRTIEANRREFL
ANLPNLSEARPEASFLDH
BO29209.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:18:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34462-PA | 312 | CG34462-PA | 1..312 | 1..312 | 1647 | 100 | Plus |
