BO29232.complete Sequence
1066 bp assembled on 2011-09-14
GenBank Submission: KX798979
> BO29232.complete
GAAGTTATCAGTCGACATGGGCAAACCAGGATTCAGTCCACGCGGTGGTG
GCGGCGGCGGCGGAGGAGGAGGAGGTGGATTCCGTGGGCGTGGTGGCGGC
GGCGGCGGAGGAGGCGGTGGATTTGGAGGCGGCCGTGGACGCGGTGGCGG
CGGCGATCGCGGTGGCCGTGGAGGATTCGGTGGTGGCCGTGGAGGAGGTG
GTCGCGGTGGTGGTGGCGGCGGCGGCCGTGGTGCCTTCGGAGGACGTGGC
GGCGGCGGTGGTCGCGGTGGCGGCGGCCGTGGAGGCGGTGGTCGCGGCGG
AGGAGGACGTGGTGGTGGTGCTGGCGGCTTCAAGGGCGGCAAGACCGTCA
CCATCGAGCCGCATCGTCACGAGGGAGTGTTCATTGCGCGCGGCAAGGAG
GACGCTCTGGTCACCAGGAACTTTGTACCTGGATCCGAAGTCTACGGCGA
GAAGCGCATCTCCGTTGAGACCAATGGCGAGAAGATTGAGTACCGCGTGT
GGAATCCCTTCCGCTCCAAGCTGGCTGCCGCCGTTCTGGGTGGCGTCGAG
CAGATTCACATGCCGCCGGGCTCGAAGGTTCTCTACCTGGGCGCCGCCTC
CGGAACGACAGTCTCGCATGTGTCCGATGTGGTGGGACCCGAGGGCCTGG
TCTACGCCGTGGAGTTCTCACACCGATCCGGTCGCGATCTGATCAACGTG
GCCAAGAAGCGCACCAACATCATACCCATCATCGAGGACGCTCGCCATCC
ACACAAGTACCGCATGCTGGTGGGCATGGTGGACACCATCTTCGCCGACG
TTGCCCAGCCGGATCAGGGCCGCATTGTGGCGCTGAATGCCCAGCACTTC
CTGAAGAACGGCGGACACTTTGTCATCTCGATCAAGGCCTCCTGCATCGA
CTCGACGGCGCAGCCCGAAGCGGTATTCGCTGCCGAGGTGAAGAAGATGC
AGGCGGACAAGCTGAAGCCCCAAGAGCAGCTCACGCTGGAGCCCTACGAG
CGAGACCACGCCGTTGTCGTTGGCGTCTACCGACCACCGCCCAAGCAGGC
AAGCTTTCTAGACCAT
BO29232.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:33:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fib-RA | 1035 | CG9888-PA | 1..1032 | 17..1048 | 5160 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:33:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fib-RA | 1318 | CG9888-RA | 132..1163 | 17..1048 | 5160 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:33:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23073064..23073644 | 1048..468 | 2905 | 100 | Minus |
| 2R | 25286936 | 2R | 23074024..23074466 | 469..27 | 2215 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:33:01 has no hits.
BO29232.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-14 12:05:44 Download gff for
BO29232.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fib-RA | 127..1158 | 17..1050 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:17:38 Download gff for
BO29232.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fib-RA | 132..1163 | 17..1050 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:12:50 Download gff for
BO29232.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fib-RA | 132..1163 | 17..1050 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:12:50 Download gff for
BO29232.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23073062..23073642 | 470..1050 | 99 | <- | Minus |
| 2R | 23074024..23074466 | 27..469 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:17:38 Download gff for
BO29232.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18960585..18961165 | 470..1050 | 99 | <- | Minus |
| arm_2R | 18961547..18961989 | 27..469 | 100 | | Minus |
BO29232.pep Sequence
Translation from 16 to 1066
> BO29232.pep
MGKPGFSPRGGGGGGGGGGGGFRGRGGGGGGGGGGFGGGRGRGGGGDRGG
RGGFGGGRGGGGRGGGGGGGRGAFGGRGGGGGRGGGGRGGGGRGGGGRGG
GAGGFKGGKTVTIEPHRHEGVFIARGKEDALVTRNFVPGSEVYGEKRISV
ETNGEKIEYRVWNPFRSKLAAAVLGGVEQIHMPPGSKVLYLGAASGTTVS
HVSDVVGPEGLVYAVEFSHRSGRDLINVAKKRTNIIPIIEDARHPHKYRM
LVGMVDTIFADVAQPDQGRIVALNAQHFLKNGGHFVISIKASCIDSTAQP
EAVFAAEVKKMQADKLKPQEQLTLEPYERDHAVVVGVYRPPPKQASFLDH
BO29232.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:18:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fib-PA | 344 | CG9888-PA | 1..344 | 1..344 | 1844 | 100 | Plus |
| CG10909-PA | 349 | CG10909-PA | 109..342 | 108..338 | 526 | 46.6 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 337..484 | 2..108 | 322 | 53.4 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 286..419 | 2..108 | 321 | 55.2 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 286..419 | 2..108 | 321 | 55.2 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 337..475 | 2..107 | 321 | 53.2 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 240..361 | 2..108 | 315 | 54.9 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 240..361 | 2..108 | 315 | 54.9 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 237..354 | 5..108 | 314 | 57 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 366..519 | 2..108 | 314 | 51.3 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 237..354 | 5..108 | 314 | 57 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 331..454 | 2..108 | 313 | 58.7 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 331..454 | 2..108 | 313 | 58.7 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 256..388 | 2..108 | 305 | 55.6 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 432..551 | 2..108 | 305 | 61.2 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 256..388 | 2..108 | 305 | 55.6 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 369..508 | 2..108 | 304 | 54.6 | Plus |
| TwdlT-PA | 286 | CG5812-PA | 25..134 | 3..116 | 304 | 58.5 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 432..540 | 2..108 | 303 | 64 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 366..515 | 2..108 | 300 | 49.7 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 399..530 | 2..104 | 299 | 53 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 301..424 | 2..108 | 294 | 56.5 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 301..424 | 2..108 | 294 | 56.5 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 235..332 | 10..108 | 291 | 62.7 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 235..332 | 10..108 | 291 | 62.7 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 399..526 | 2..108 | 290 | 53.9 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 419..541 | 10..104 | 283 | 53.7 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 468..590 | 2..115 | 250 | 49.6 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 459..573 | 2..107 | 248 | 51.7 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 459..579 | 2..115 | 239 | 49.6 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 35..175 | 10..158 | 234 | 41.7 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 35..175 | 10..158 | 234 | 41.7 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 462..602 | 2..101 | 223 | 46.5 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 481..591 | 2..101 | 213 | 50 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 45..125 | 4..81 | 197 | 56.1 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 45..125 | 4..81 | 197 | 56.1 | Plus |
