BO29270.complete Sequence
1834 bp assembled on 2012-04-24
GenBank Submission: KX795394
> BO29270.complete
GAAGTTATCAGTCGACATGTCCAATTTGAGCGAAGATTCCTACGATTATG
TTTTTGGTGGTCGACGTAAGACTCCGCCCACAACAACGTCTACACAACTC
AAGCTGACCTCACCGCCAGTGCGTTTGCGACCCGAAGACGCCTATCGAGG
AGCCAACATAAACAACGGAAGGTTCTATCGCCACTCCTTCAGCTACGCCC
CCAAAAGGCAGCGCCACTCGAGTCGGGATGATCGAGACCGCGAGTCTAGG
TTGAGATGTCATGGCGAGGATGAGGCCACACTGCGCCAATTGCTGCTCGA
TTTGCAAAAGCAAGTTAGCGTGATGAGCATGAATCTGTCAGCGAAACTCG
ATGAGCTGCAGCGGGGAGATCGACACCTGGAGACGACGGTCGCCCTGTGC
GAAATCCGCACCCAGCTCCAGGAGCTGACCAAATCCGTGGAGAGCTGCCA
GAGCGAGGTGTCCGAGGTGAAGCGCGACATGGTGGCCATCAAGCACGAAC
TGGACACCGTGCAGCAGGTGAAGGAGGAGATCGAGGAGCTGCGCGAATAC
GTCGATCGACTGGAGGAGCACACGCACAGACGGAAGCTAAGACTTTTAGA
ACAAGGTCTCACCTTCTTCCTCACCTACTCGATTTTCTCGGCGGTGCTGG
GCATGCTGCAATTCGGCTACAACACCGGCGTCATCAACGCGCCCGAAAAG
AATATCGAGAACTTCATGAAGGACGTCTACAAGGACCGCTACGGCGAGGA
CATCAGCGAGGAGTTCATCCAGCAGCTCTACTCGGTGGCGGTATCCATTT
TCGCCATCGGCGGCATGCTGGGCGGTTTCAGCGGAGGCTGGATGGCCAAC
CGCTTTGGCAGAAAAGGCGGCCTACTGTTGAACAATGTGCTCGGAATTGC
CGGCGCCTGTTTGATGGGATTTACCAAAGTTAGTCATTCCTATGAAATGT
TATTCCTTGGCCGATTTATAATTGGTGTTAATTGCGGCCTCAACACTTCG
CTGGTGCCCATGTACATCTCGGAGATAGCGCCACTGAATCTGCGCGGTGG
CTTAGGAACTGTTAATCAATTGGCTGTGACTGTAGGTTTACTATTATCCC
AAGTGCTGGGCATCGAGCAAATCCTCGGCACCAACGAGGGCTGGCCCATC
CTCCTGGGCCTGGCCATCTGCCCGGCGATCCTGCAGCTGATCCTGCTGCC
CGTCTGCCCGGAATCGCCCAGATATCTGCTCATTACCAAGCAGTGGGAGG
AGGAGGCGCGAAAAGCCCTGCGCCGACTGCGAGCCTCTGGGTCCGTGGAG
GAGGACATCGAGGAGATGCGGGCCGAGGAGCGCGCCCAGCAGTCCGAGAG
CCACATATCGACCATGGAGCTGATATGCTCGCCCACCCTGCGCCCTCCGC
TGATCATCGGCATCGTGATGCAGCTGAGCCAGCAATTCAGCGGCATCAAC
GCCGTCTTCTACTATTCCACGTCGCTGTTCATGAGCTCGGGATTGACTGA
GGAGAGCGCCAAGTTCGCTACGATAGGCATCGGCGCCATAATGGTTGTTA
TGACGCTCGTGTCCATTCCGCTAATGGATCGCACGGGTCGCCGGACCCTG
CATCTCTATGGTCTGGGCGGAATGTTCATCTTCTCAATCTTCATCACCAT
TTCGTTCCTGATCAAGGCAAGTATAGTGGTGTCCAGGATTCTTGAGTCCT
GCTCTTGCTCCTGTAGAGTAATGCCTGCGAATGTCAATGCTAAGATGCCT
GCCAGTTTGGGTTTGCATTTGTTTGTCCCCCGCCCGTTCAGTGATTTGCA
TATGACTCTGAAATCCGCAAGCTTTCTAGACCAT
BO29270.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:20:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Glut1-RS | 1944 | CG43946-PS | 143..1941 | 18..1816 | 8995 | 100 | Plus |
| Glut1-RX | 2355 | CG43946-PX | 143..1792 | 18..1667 | 8250 | 100 | Plus |
| Glut1-RW | 2235 | CG43946-PW | 143..1792 | 18..1667 | 8250 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:20:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Glut1-RS | 2886 | CG43946-RS | 953..2751 | 18..1816 | 8995 | 100 | Plus |
| Glut1-RX | 5560 | CG43946-RX | 761..2410 | 18..1667 | 8250 | 100 | Plus |
| Glut1-RW | 3014 | CG43946-RW | 761..2410 | 18..1667 | 8250 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:20:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 981824..982105 | 1264..1545 | 1410 | 100 | Plus |
| 3L | 28110227 | 3L | 981486..981765 | 986..1265 | 1400 | 100 | Plus |
| 3L | 28110227 | 3L | 982174..982447 | 1543..1816 | 1370 | 100 | Plus |
| 3L | 28110227 | 3L | 980951..981207 | 605..861 | 1285 | 100 | Plus |
| 3L | 28110227 | 3L | 979772..979941 | 301..470 | 850 | 100 | Plus |
| 3L | 28110227 | 3L | 974136..974300 | 136..300 | 825 | 100 | Plus |
| 3L | 28110227 | 3L | 980052..980192 | 465..605 | 705 | 100 | Plus |
| 3L | 28110227 | 3L | 981292..981421 | 858..987 | 650 | 100 | Plus |
| 3L | 28110227 | 3L | 973823..973942 | 18..137 | 600 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:20:20 has no hits.
BO29270.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:02:04 Download gff for
BO29270.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glut1-RG | 953..2752 | 17..1818 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:14 Download gff for
BO29270.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glut1-RS | 951..2751 | 17..1818 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:15:45 Download gff for
BO29270.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glut1-RS | 951..2751 | 17..1818 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:15:45 Download gff for
BO29270.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 973821..973942 | 17..137 | 99 | -> | Plus |
| 3L | 974138..974300 | 138..300 | 100 | -> | Plus |
| 3L | 979772..979937 | 301..466 | 100 | -> | Plus |
| 3L | 980054..980191 | 467..604 | 100 | -> | Plus |
| 3L | 980951..981207 | 605..861 | 100 | -> | Plus |
| 3L | 981296..981420 | 862..986 | 100 | -> | Plus |
| 3L | 981487..981765 | 987..1265 | 100 | -> | Plus |
| 3L | 981826..982103 | 1266..1543 | 100 | -> | Plus |
| 3L | 982175..982447 | 1544..1818 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:14 Download gff for
BO29270.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 974138..974300 | 138..300 | 100 | -> | Plus |
| arm_3L | 979772..979937 | 301..466 | 100 | -> | Plus |
| arm_3L | 980054..980191 | 467..604 | 100 | -> | Plus |
| arm_3L | 973821..973942 | 17..137 | 99 | -> | Plus |
| arm_3L | 980951..981207 | 605..861 | 100 | -> | Plus |
| arm_3L | 981296..981420 | 862..986 | 100 | -> | Plus |
| arm_3L | 981487..981765 | 987..1265 | 100 | -> | Plus |
| arm_3L | 981826..982103 | 1266..1543 | 100 | -> | Plus |
| arm_3L | 982175..982447 | 1544..1818 | 99 | | Plus |
BO29270.pep Sequence
Translation from 16 to 1834
> BO29270.pep
MSNLSEDSYDYVFGGRRKTPPTTTSTQLKLTSPPVRLRPEDAYRGANINN
GRFYRHSFSYAPKRQRHSSRDDRDRESRLRCHGEDEATLRQLLLDLQKQV
SVMSMNLSAKLDELQRGDRHLETTVALCEIRTQLQELTKSVESCQSEVSE
VKRDMVAIKHELDTVQQVKEEIEELREYVDRLEEHTHRRKLRLLEQGLTF
FLTYSIFSAVLGMLQFGYNTGVINAPEKNIENFMKDVYKDRYGEDISEEF
IQQLYSVAVSIFAIGGMLGGFSGGWMANRFGRKGGLLLNNVLGIAGACLM
GFTKVSHSYEMLFLGRFIIGVNCGLNTSLVPMYISEIAPLNLRGGLGTVN
QLAVTVGLLLSQVLGIEQILGTNEGWPILLGLAICPAILQLILLPVCPES
PRYLLITKQWEEEARKALRRLRASGSVEEDIEEMRAEERAQQSESHISTM
ELICSPTLRPPLIIGIVMQLSQQFSGINAVFYYSTSLFMSSGLTEESAKF
ATIGIGAIMVVMTLVSIPLMDRTGRRTLHLYGLGGMFIFSIFITISFLIK
ASIVVSRILESCSCSCRVMPANVNAKMPASLGLHLFVPRPFSDLHMTLKS
ASFLDH
BO29270.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:17:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Glut1-PS | 647 | CG43946-PS | 48..647 | 1..600 | 3043 | 99.8 | Plus |
| Glut1-PX | 784 | CG43946-PX | 48..600 | 1..553 | 2788 | 99.5 | Plus |
| Glut1-PW | 744 | CG43946-PW | 48..600 | 1..553 | 2788 | 99.5 | Plus |
| Glut1-PV | 717 | CG43946-PV | 48..600 | 1..553 | 2788 | 99.5 | Plus |
| Glut1-PL | 602 | CG43946-PL | 1..448 | 103..550 | 2255 | 100 | Plus |
