BO29307.complete Sequence
361 bp assembled on 2012-04-24
GenBank Submission: KX798165
> BO29307.complete
GAAGTTATCAGTCGACATGTCTCGACACAAGCCCGCGTCGGTGGTGCTAA
CGCTGCTGTTGGTGGTGCTGTTGGCGCTGATCCACCACCGCCGCATAGAT
GCCAGATTCGTGCCCGGTCCGCCTTCAATACCCAGTATTTGCAAAAAACC
ACCGCCACGTTCGGAGGGCGTTTGTGCCATTGATATCGAGGGATACTATT
ACGATCCGATAACATTTGACTGCAAGATGTACAAGATCGGGGCATGCCAC
TTGATTCGTGGCCAGAGTTTCGGCAGTCAACAGGATTGCATTTCCACCTG
CATCCATGGGATACGCCGGAATCATGACTTTTATGTGAACGAGGCAAGCT
TTCTAGACCAT
BO29307.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:44:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31777-RA | 330 | CG31777-PA | 1..327 | 17..343 | 1635 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:44:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31777-RA | 383 | CG31777-RA | 17..351 | 9..343 | 1645 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:44:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3706583..3706791 | 343..135 | 1045 | 100 | Minus |
2L | 23513712 | 2L | 3706920..3707047 | 136..9 | 610 | 98.4 | Minus |
Blast to na_te.dros performed 2014-11-28 04:44:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6847..6893 | 83..37 | 127 | 74.5 | Minus |
BO29307.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:00:33 Download gff for
BO29307.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31777-RA | 22..348 | 17..345 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:56 Download gff for
BO29307.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31777-RA | 25..351 | 17..345 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:56:15 Download gff for
BO29307.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31777-RA | 25..351 | 17..345 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:56:15 Download gff for
BO29307.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3706922..3707039 | 17..134 | 100 | | Minus |
2L | 3706581..3706791 | 135..345 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:56 Download gff for
BO29307.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 3706581..3706791 | 135..345 | 99 | <- | Minus |
arm_2L | 3706922..3707039 | 17..134 | 100 | | Minus |
BO29307.pep Sequence
Translation from 16 to 361
> BO29307.pep
MSRHKPASVVLTLLLVVLLALIHHRRIDARFVPGPPSIPSICKKPPPRSE
GVCAIDIEGYYYDPITFDCKMYKIGACHLIRGQSFGSQQDCISTCIHGIR
RNHDFYVNEASFLDH
BO29307.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:12:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31777-PA | 109 | CG31777-PA | 1..109 | 1..109 | 594 | 100 | Plus |