Clone BO29403 Report

Search the DGRC for BO29403

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:294
Well:3
Vector:pDNR-Dual
Associated Gene/TranscriptCG31812-RB
Protein status:BO29403.pep: Imported from assembly
Sequenced Size:733

Clone Sequence Records

BO29403.complete Sequence

733 bp assembled on 2012-04-24

GenBank Submission: KX798427

> BO29403.complete
GAAGTTATCAGTCGACATGCAGTTTACATTTGAGTGCAAAAGAAAGCGCT
GCTTTAATAAGAATGCGAATTTCACGCCTCTTCCAAGTGGACAGGATGGC
GAACGTTACAAGGGAAGATTTACAGGACTATCCGTCGAGATAGTTGATCC
CGAACAGGCTAAATCCCTGCACGATAATGGTTGTTTTGGCAAGGGAAGCA
AATCTCGCGGAGGGCCAGCAAGTGGAGACGAGAACGAAACCCTGTTTCTC
GGAATGGAAGAGTCTTGCTTCCTGGCCCACTATTTAAATGTTTTAGATAT
AACCAACTCAGCTGGTTATTTAATGGACTTCTGCATGTTTGTGGAGGTCG
CCAAAGAGCACAATGAGAAATTTGTTGAGAACTTGGCCAGCTATGTGTAT
TTGAAGTCCAAGAATTGGGTCATCAAGAGCGGTATTAAGTTCGGCGGTGA
TTTTCTTATCTACAAGCAAAGTCCTCGATTGTACCATGCCAGCTTTTTGG
TCATTGTGCAAAAGCCTGGTGATACGGATCACTATCAATCAAAGAACTTG
AAGGGTGTTCAACGCGTGGCAGAAACTTCTGATAAGGATGTGCTGCTCCT
GACTGTCCAACCGCCTAAGAAGATAAGCTCTTCCAGGGATTTGCAGGAAG
CCACAGTAACAGAGACTATTGTGCGGCGTTTTAATTACTTAACTTTTGTA
CAAAGCAAACAACAAGCAAGCTTTCTAGACCAT

BO29403.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:45:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG31812-RB 702 CG31812-PB 1..699 17..715 3480 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:45:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG31812-RB 1369 CG31812-RB 2..700 17..715 3480 99.9 Plus
CG17996-RA 529 CG17996-RA 457..529 715..643 365 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:45:00
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16729778..16730216 17..455 2180 99.8 Plus
2L 23513712 2L 16730271..16730530 456..715 1300 100 Plus
Blast to na_te.dros performed on 2014-11-28 04:45:01 has no hits.

BO29403.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:00:35 Download gff for BO29403.complete
Subject Subject Range Query Range Percent Splice Strand
CG31812-RB 1..699 17..717 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:02 Download gff for BO29403.complete
Subject Subject Range Query Range Percent Splice Strand
CG31812-RB 2..700 17..717 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:56:26 Download gff for BO29403.complete
Subject Subject Range Query Range Percent Splice Strand
CG31812-RB 2..700 17..717 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:56:26 Download gff for BO29403.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16729778..16730216 17..455 99 -> Plus
2L 16730271..16730530 456..717 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:02 Download gff for BO29403.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16730271..16730530 456..717 99   Plus
arm_2L 16729778..16730216 17..455 99 -> Plus

BO29403.pep Sequence

Translation from 16 to 733

> BO29403.pep
MQFTFECKRKRCFNKNANFTPLPSGQDGERYKGRFTGLSVEIVDPEQAKS
LHDNGCFGKGSKSRGGPASGDENETLFLGMEESCFLAHYLNVLDITNSAG
YLMDFCMFVEVAKEHNEKFVENLASYVYLKSKNWVIKSGIKFGGDFLIYK
QSPRLYHASFLVIVQKPGDTDHYQSKNLKGVQRVAETSDKDVLLLTVQPP
KKISSSRDLQEATVTETIVRRFNYLTFVQSKQQASFLDH

BO29403.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:12:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG31812-PB 233 CG31812-PB 1..233 1..233 1223 100 Plus