BO29403.complete Sequence
733 bp assembled on 2012-04-24
GenBank Submission: KX798427
> BO29403.complete
GAAGTTATCAGTCGACATGCAGTTTACATTTGAGTGCAAAAGAAAGCGCT
GCTTTAATAAGAATGCGAATTTCACGCCTCTTCCAAGTGGACAGGATGGC
GAACGTTACAAGGGAAGATTTACAGGACTATCCGTCGAGATAGTTGATCC
CGAACAGGCTAAATCCCTGCACGATAATGGTTGTTTTGGCAAGGGAAGCA
AATCTCGCGGAGGGCCAGCAAGTGGAGACGAGAACGAAACCCTGTTTCTC
GGAATGGAAGAGTCTTGCTTCCTGGCCCACTATTTAAATGTTTTAGATAT
AACCAACTCAGCTGGTTATTTAATGGACTTCTGCATGTTTGTGGAGGTCG
CCAAAGAGCACAATGAGAAATTTGTTGAGAACTTGGCCAGCTATGTGTAT
TTGAAGTCCAAGAATTGGGTCATCAAGAGCGGTATTAAGTTCGGCGGTGA
TTTTCTTATCTACAAGCAAAGTCCTCGATTGTACCATGCCAGCTTTTTGG
TCATTGTGCAAAAGCCTGGTGATACGGATCACTATCAATCAAAGAACTTG
AAGGGTGTTCAACGCGTGGCAGAAACTTCTGATAAGGATGTGCTGCTCCT
GACTGTCCAACCGCCTAAGAAGATAAGCTCTTCCAGGGATTTGCAGGAAG
CCACAGTAACAGAGACTATTGTGCGGCGTTTTAATTACTTAACTTTTGTA
CAAAGCAAACAACAAGCAAGCTTTCTAGACCAT
BO29403.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:45:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31812-RB | 702 | CG31812-PB | 1..699 | 17..715 | 3480 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:45:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31812-RB | 1369 | CG31812-RB | 2..700 | 17..715 | 3480 | 99.9 | Plus |
CG17996-RA | 529 | CG17996-RA | 457..529 | 715..643 | 365 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:45:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16729778..16730216 | 17..455 | 2180 | 99.8 | Plus |
2L | 23513712 | 2L | 16730271..16730530 | 456..715 | 1300 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:45:01 has no hits.
BO29403.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:00:35 Download gff for
BO29403.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31812-RB | 1..699 | 17..717 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:02 Download gff for
BO29403.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31812-RB | 2..700 | 17..717 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:56:26 Download gff for
BO29403.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31812-RB | 2..700 | 17..717 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:56:26 Download gff for
BO29403.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16729778..16730216 | 17..455 | 99 | -> | Plus |
2L | 16730271..16730530 | 456..717 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:02 Download gff for
BO29403.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16730271..16730530 | 456..717 | 99 | | Plus |
arm_2L | 16729778..16730216 | 17..455 | 99 | -> | Plus |
BO29403.pep Sequence
Translation from 16 to 733
> BO29403.pep
MQFTFECKRKRCFNKNANFTPLPSGQDGERYKGRFTGLSVEIVDPEQAKS
LHDNGCFGKGSKSRGGPASGDENETLFLGMEESCFLAHYLNVLDITNSAG
YLMDFCMFVEVAKEHNEKFVENLASYVYLKSKNWVIKSGIKFGGDFLIYK
QSPRLYHASFLVIVQKPGDTDHYQSKNLKGVQRVAETSDKDVLLLTVQPP
KKISSSRDLQEATVTETIVRRFNYLTFVQSKQQASFLDH
BO29403.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:12:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31812-PB | 233 | CG31812-PB | 1..233 | 1..233 | 1223 | 100 | Plus |