BO29504.complete Sequence
814 bp assembled on 2011-09-15
> BO29504.complete
GAAGTTATCAGTCGACATGTCGCTACGTTTGGGTTTGTTTCTTTTGGCTG
CACTTGGTGTGGTAATTCTCACGGATTCCGCCTCCATAAGCACCCACATT
GTTGGTGGCGATCAGGCGGACATCGCTGACTTTCCGTACCAGGTGTCCGT
TCGCCTGGAGACCTACATGCTGCTCCACATCTGCGGTGGTAGCATCTATG
CACCACGGGTCGTCATCACCGCCGCCCACTGCATCAAGGGACGCTATGCC
TCGTACATCCGGATCGTGGCTGGTCAGAACTCGATTGCCGATCTGGAGGA
GCAGGGTGTTAAGGTCAGCAAACTGATCCCCCATGCCGGCTACAATAAGA
AAACGTATGTGAATGATATCGGTTTGATCATCACTCGCGAGCCATTGGAG
TACTCAGCCCTGGTGCAACCCATTGCTGTGGCCCTGGAGGCACCGCCGTC
GGGTGCCCAGGCCGTTGTAAGTGGTTGGGGCAAGCGGGCTGAAGATGATG
AAGCTCTGCCCGCCATGCTGCGCGCCGTTGAGCTGCAGATCATCGAGAAG
AGCACCTGCGGTGCCCAGTATCTGACCAAGGACTACACGGTGACCGATGA
GATGCTCTGCGCCGGCTATCTGGAGGGCGGCAAGGACACCTGCAACGGCG
ATTCCGGTGGACCCTTGGCCGTGGACGGAGTCCTGGTGGGTGTGGTGTCC
TGGGGCGTGGGTTGCGGCAGGGAAGGATTCCCGGGTGTCTACACCAGCGT
CAATTCCCATATCGATTGGATCGAAGAGCAGGCGGAGGCGTATCTCGCAA
GCTTTCTAGACCAT
BO29504.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:45:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8299-RA | 783 | CG8299-PA | 1..780 | 17..796 | 3900 | 100 | Plus |
| Try29F-RD | 804 | CG9564-PD | 613..717 | 602..706 | 180 | 78.1 | Plus |
| Try29F-RC | 804 | CG9564-PC | 613..717 | 602..706 | 180 | 78.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:45:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8299-RA | 874 | CG8299-RA | 1..780 | 17..796 | 3900 | 100 | Plus |
| Try29F-RD | 1280 | CG9564-RD | 687..791 | 602..706 | 180 | 78.1 | Plus |
| Try29F-RC | 932 | CG9564-RC | 687..791 | 602..706 | 180 | 78.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:45:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15940704..15941484 | 796..16 | 3905 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:45:51 has no hits.
BO29504.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-15 17:46:05 Download gff for
BO29504.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8299-RA | 1..780 | 17..798 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:22:10 Download gff for
BO29504.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8299-RA | 1..780 | 17..798 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:16:31 Download gff for
BO29504.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8299-RA | 1..780 | 17..798 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:16:31 Download gff for
BO29504.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15940702..15941483 | 17..798 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:22:10 Download gff for
BO29504.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11828207..11828988 | 17..798 | 99 | | Minus |
BO29504.pep Sequence
Translation from 16 to 814
> BO29504.pep
MSLRLGLFLLAALGVVILTDSASISTHIVGGDQADIADFPYQVSVRLETY
MLLHICGGSIYAPRVVITAAHCIKGRYASYIRIVAGQNSIADLEEQGVKV
SKLIPHAGYNKKTYVNDIGLIITREPLEYSALVQPIAVALEAPPSGAQAV
VSGWGKRAEDDEALPAMLRAVELQIIEKSTCGAQYLTKDYTVTDEMLCAG
YLEGGKDTCNGDSGGPLAVDGVLVGVVSWGVGCGREGFPGVYTSVNSHID
WIEEQAEAYLASFLDH
BO29504.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:19:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8299-PA | 260 | CG8299-PA | 1..260 | 1..260 | 1339 | 100 | Plus |
| betaTry-PB | 253 | CG18211-PB | 31..253 | 28..256 | 443 | 41.1 | Plus |
| betaTry-PA | 253 | CG18211-PA | 31..253 | 28..256 | 443 | 41.1 | Plus |
| alphaTry-PA | 256 | CG18444-PA | 31..255 | 28..258 | 435 | 39.5 | Plus |
| etaTry-PA | 262 | CG12386-PA | 12..262 | 7..260 | 428 | 39 | Plus |
