BO29507.complete Sequence
553 bp assembled on 2011-09-15
> BO29507.complete
GAAGTTATCAGTCGACATGCTTCACAAGCTGACTTGGGTTCTAATATTTA
TACCTGCTTTTCGAGCTGCCGATCCCATTTGCTCTCAAAGGCCGGATGTA
ACTGCCTTGAGAAACTGTTGCAAGCTGCCTAATCTGGACTTTTCGAGTTT
CAACTCCAAGTGCAGTCAGTATTTGGTCAATGGAGTCCACATATCACCTT
GCAGCTTTGAGTGCATCTTTCGAGCGGCGAATGCATTAAATGGCACCCAT
TTGGTTATGGAAAATATCGAAAAGATGATGAAAACCATTTTGGGCTCTGA
TGAATTTGTGCACGTGTATCTGGATGGATTCAGGAGCTGCGGTAATCAGG
AGAAGGTGCTCATTAAGGCAATGAAACGTCGCCGTGTTCCCATCACCGGA
AAATGTGGCTCGATGGCGATAATGTATGGCCTGTGTGCCCATCGATATGT
CTACCGTAATTGCCCGGAAAGCGTGTGGAGCAAGAGTGCCACCTGCAATG
AGGCCAGGGAATACAGCATTCGCTGCGATGACATGGCAAGCTTTCTAGAC
CAT
BO29507.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:46:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp50d-RA | 522 | CG30074-PA | 1..519 | 17..535 | 2595 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:46:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp50d-RA | 587 | CG30074-RA | 12..535 | 12..535 | 2605 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:46:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14373421..14373756 | 200..535 | 1680 | 100 | Plus |
| 2R | 25286936 | 2R | 14373266..14373361 | 104..199 | 480 | 100 | Plus |
| 2R | 25286936 | 2R | 14373119..14373211 | 12..104 | 450 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:46:57 has no hits.
BO29507.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-15 17:46:07 Download gff for
BO29507.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp50d-RA | 1..519 | 17..537 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:22:37 Download gff for
BO29507.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp50d-RA | 17..535 | 17..537 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:16:50 Download gff for
BO29507.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp50d-RA | 17..535 | 17..537 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:16:50 Download gff for
BO29507.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14373124..14373210 | 17..103 | 100 | -> | Plus |
| 2R | 14373266..14373361 | 104..199 | 100 | -> | Plus |
| 2R | 14373421..14373756 | 200..537 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:22:37 Download gff for
BO29507.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10260629..10260715 | 17..103 | 100 | -> | Plus |
| arm_2R | 10260771..10260866 | 104..199 | 100 | -> | Plus |
| arm_2R | 10260926..10261261 | 200..537 | 99 | | Plus |
BO29507.pep Sequence
Translation from 16 to 553
> BO29507.pep
MLHKLTWVLIFIPAFRAADPICSQRPDVTALRNCCKLPNLDFSSFNSKCS
QYLVNGVHISPCSFECIFRAANALNGTHLVMENIEKMMKTILGSDEFVHV
YLDGFRSCGNQEKVLIKAMKRRRVPITGKCGSMAIMYGLCAHRYVYRNCP
ESVWSKSATCNEAREYSIRCDDMASFLDH
BO29507.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:19:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp50d-PA | 173 | CG30074-PA | 1..173 | 1..173 | 938 | 100 | Plus |
| Obp50c-PC | 185 | CG30072-PC | 1..174 | 1..170 | 286 | 30.5 | Plus |
| Obp50a-PA | 181 | CG30067-PA | 6..169 | 1..170 | 170 | 24.6 | Plus |
