Clone BO29510 Report

Search the DGRC for BO29510

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:295
Well:10
Vector:pDNR-Dual
Protein status:BO29510.pep: Imported from assembly
Sequenced Size:607

Clone Sequence Records

BO29510.complete Sequence

607 bp assembled on 2011-09-15

> BO29510.complete
GAAGTTATCAGTCGACATGATTAAGGAAATATACTTCCAACTCGTCATTG
TTTCGCTGGCTGTACTGTTACCAGCGAATAGTTATCCCCTGGAGCCAAAT
GCGGAAAATGCATGCGAATTTATCAGGAACGTTGCGCGATTTCCAGACGA
TGAGAATGCTTGGTGGGAAAAGAGTAAAAGTTTAGCCAATTCCATTTTGG
AGACCAAAATCAATTATAAAGGATCATACCGTTCCTGTAACCAATATGTT
GCTACCCTACAAAATCTAAAAAATCGTGGAAATGAATTAAATGCATCCAG
TCCTTGGGCACAAATAATTGAATATCTTAACGCATCCTCACAGGAATATG
AAGGTGGTCCGTGTACTGATGAGGAACCCTACAGTTATATATATTCAAGT
AACATTAAAAACATGAAAAACGATATACGCGAATTGAGTCAACATGTGAA
AGATCAAATCGAATATCATAATTTGGTGGCACATATTGATACGAATGTCA
ATACGATCATAAATACATTATCTGGTTTCTCTATTCCGATATTGAAGTAT
TTAACACGGTTTCCTTCGGCAAAGTGTACTCTGCCCAATGCAAGCTTTCT
AGACCAT

BO29510.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:45:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG42763-RA 576 CG42763-PA 1..573 17..589 2865 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:45:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG42763-RA 660 CG42763-RA 20..592 17..589 2865 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:45:04
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8144459..8144981 589..67 2615 100 Minus
2L 23513712 2L 8145034..8145088 71..17 260 98.2 Minus
Blast to na_te.dros performed on 2014-11-27 07:45:05 has no hits.

BO29510.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-15 17:46:04 Download gff for BO29510.complete
Subject Subject Range Query Range Percent Splice Strand
CG42763-RA 1..573 17..591 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:21:52 Download gff for BO29510.complete
Subject Subject Range Query Range Percent Splice Strand
CG42763-RA 20..592 17..591 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:16:18 Download gff for BO29510.complete
Subject Subject Range Query Range Percent Splice Strand
CG42763-RA 20..592 17..591 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:16:18 Download gff for BO29510.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8144455..8144980 68..591 99 <- Minus
2L 8145038..8145088 17..67 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:21:52 Download gff for BO29510.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8144455..8144980 68..591 99 <- Minus
arm_2L 8145038..8145088 17..67 100   Minus

BO29510.pep Sequence

Translation from 16 to 607

> BO29510.pep
MIKEIYFQLVIVSLAVLLPANSYPLEPNAENACEFIRNVARFPDDENAWW
EKSKSLANSILETKINYKGSYRSCNQYVATLQNLKNRGNELNASSPWAQI
IEYLNASSQEYEGGPCTDEEPYSYIYSSNIKNMKNDIRELSQHVKDQIEY
HNLVAHIDTNVNTIINTLSGFSIPILKYLTRFPSAKCTLPNASFLDH

BO29510.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:19:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG42763-PA 191 CG42763-PA 1..191 1..191 1006 100 Plus