BO29511.complete Sequence
376 bp assembled on 2011-09-15
> BO29511.complete
GAAGTTATCAGTCGACATGATCCCAATAAGCTCATCAAAATTAAATAGGA
AACTGGCAAGTAAACCCTTCCTAAATGAAGGACTACCTGCCAGAAAGTCT
ATCGGTTGTCTTTTTCTTGGCATAATACTTGGAGTTTTTTTAGCCGGAAT
ACTCTTTTACTCGCTGATGAACGAAGACTGCCGGAAAAGTTCGAGGAATA
TAATGAGCATTATTGGAGTGGAAATACCTCAAAACAAAAACGCCACATCG
AAATTGGATACTGCCGCAAAAAATGTAGAAGAGAGTAGCGTAGCGGTTAC
ACAAGAAACCCCTGCTGAATTTAATAAAGCTGATAATAATTCAACAGTTT
CAATGCCCGCAAGCTTTCTAGACCAT
BO29511.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:45:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43084-RA | 345 | CG43084-PA | 1..342 | 17..358 | 1710 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:45:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43084-RA | 450 | CG43084-RA | 40..381 | 17..358 | 1710 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:45:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15651043..15651323 | 78..358 | 1405 | 100 | Plus |
3L | 28110227 | 3L | 15650891..15650955 | 17..81 | 325 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:45:22 has no hits.
BO29511.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-15 17:46:05 Download gff for
BO29511.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43084-RA | 1..342 | 17..360 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:21:59 Download gff for
BO29511.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43084-RA | 40..381 | 17..360 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:16:23 Download gff for
BO29511.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43084-RA | 40..381 | 17..360 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:16:23 Download gff for
BO29511.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15650891..15650954 | 17..80 | 100 | -> | Plus |
3L | 15651046..15651323 | 81..360 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:21:59 Download gff for
BO29511.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15643991..15644054 | 17..80 | 100 | -> | Plus |
arm_3L | 15644146..15644423 | 81..360 | 99 | | Plus |
BO29511.pep Sequence
Translation from 16 to 376
> BO29511.pep
MIPISSSKLNRKLASKPFLNEGLPARKSIGCLFLGIILGVFLAGILFYSL
MNEDCRKSSRNIMSIIGVEIPQNKNATSKLDTAAKNVEESSVAVTQETPA
EFNKADNNSTVSMPASFLDH
BO29511.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:19:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43084-PA | 114 | CG43084-PA | 1..114 | 1..114 | 566 | 100 | Plus |