Clone BO29511 Report

Search the DGRC for BO29511

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:295
Well:11
Vector:pDNR-Dual
Protein status:BO29511.pep: Imported from assembly
Sequenced Size:376

Clone Sequence Records

BO29511.complete Sequence

376 bp assembled on 2011-09-15

> BO29511.complete
GAAGTTATCAGTCGACATGATCCCAATAAGCTCATCAAAATTAAATAGGA
AACTGGCAAGTAAACCCTTCCTAAATGAAGGACTACCTGCCAGAAAGTCT
ATCGGTTGTCTTTTTCTTGGCATAATACTTGGAGTTTTTTTAGCCGGAAT
ACTCTTTTACTCGCTGATGAACGAAGACTGCCGGAAAAGTTCGAGGAATA
TAATGAGCATTATTGGAGTGGAAATACCTCAAAACAAAAACGCCACATCG
AAATTGGATACTGCCGCAAAAAATGTAGAAGAGAGTAGCGTAGCGGTTAC
ACAAGAAACCCCTGCTGAATTTAATAAAGCTGATAATAATTCAACAGTTT
CAATGCCCGCAAGCTTTCTAGACCAT

BO29511.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:45:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG43084-RA 345 CG43084-PA 1..342 17..358 1710 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:45:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG43084-RA 450 CG43084-RA 40..381 17..358 1710 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:45:21
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15651043..15651323 78..358 1405 100 Plus
3L 28110227 3L 15650891..15650955 17..81 325 100 Plus
Blast to na_te.dros performed on 2014-11-27 07:45:22 has no hits.

BO29511.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-15 17:46:05 Download gff for BO29511.complete
Subject Subject Range Query Range Percent Splice Strand
CG43084-RA 1..342 17..360 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:21:59 Download gff for BO29511.complete
Subject Subject Range Query Range Percent Splice Strand
CG43084-RA 40..381 17..360 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:16:23 Download gff for BO29511.complete
Subject Subject Range Query Range Percent Splice Strand
CG43084-RA 40..381 17..360 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:16:23 Download gff for BO29511.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15650891..15650954 17..80 100 -> Plus
3L 15651046..15651323 81..360 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:21:59 Download gff for BO29511.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15643991..15644054 17..80 100 -> Plus
arm_3L 15644146..15644423 81..360 99   Plus

BO29511.pep Sequence

Translation from 16 to 376

> BO29511.pep
MIPISSSKLNRKLASKPFLNEGLPARKSIGCLFLGIILGVFLAGILFYSL
MNEDCRKSSRNIMSIIGVEIPQNKNATSKLDTAAKNVEESSVAVTQETPA
EFNKADNNSTVSMPASFLDH

BO29511.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:19:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG43084-PA 114 CG43084-PA 1..114 1..114 566 100 Plus