Clone BO29601 Report

Search the DGRC for BO29601

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:296
Well:1
Vector:pDNR-Dual
Associated Gene/TranscriptCG14367-RA
Protein status:BO29601.pep: Imported from assembly
Sequenced Size:964

Clone Sequence Records

BO29601.complete Sequence

964 bp assembled on 2012-04-24

GenBank Submission: KX795642

> BO29601.complete
GAAGTTATCAGTCGACATGTCGGTGGAAGACTCCTGGGTTTTCGATTCGC
TGGTGTGCTTCCTGCACGGGCCCATTTGGAATGCTCCGCTTCAGACGTTC
ATAGAGCAAAAGTCCTTAGTCTTCGATCCCAACCAGCAGTTGGATGAGAA
CAATCCGGACATACTGCAGATACACGAGGAATACAAGAATCTGGTGGACT
ACATGCTCGGCAGCTTCATGGAGGAGATGCAGATATCACCGGAGCAGTTC
GAAATGGCCTGTCTGGAGGGTAGGCAGCAGGGTCAGGGCGAGAATCCCTT
TCATTTCCACCAGGTGCTTTTCCAGCAGATATGGGCCGCCAACGATCTGA
AGATATTCATACGGATGATGACGCAACGCAACGTGGAGCTTCAGCTGCAG
GCCCTGGATCTCATAGAGAAAAATCAATTAGCCCCTGGTGGCGTCGAGGA
GGGGGATGACCGCAGTGCGGACGCTAGCTCGGATCCAGGGGATACCGCCT
CCGAGGTGGAACAAATGATAGCCAAGACGGTGTCTGACGAACTGGAGAGC
CCCGAAGCGGCCCTAACTCCAGAGCAGGAGCCCAATCTGGAGCTGGTTAA
CGACAAGTTCCAGCGCCTGAATCTGTTCTTCGAGCAGGAGGATCGTGTGG
ACCCCAGTGATGTTGTCTCGCGGCAGGAGTACCTGCGCCAACAGCGTGAC
AAGATTGTGGAGATAAAGAAGCAGACGCGTGCAAAGCAACTGCAAGAGAC
CATGTCCCGCGGTACTCCACATGCACCGGAAGGAGCACGTCCCAGCTCCG
CGTTGGTGGCCCAACAGCTGCTCGAGAATGGCGGCCAGACTAAGGAGCTC
TCCATGCCGGCACCACTAGAAGCTGAGGAGAACGCTGCCCTGCAGCTCAG
ACGCAATCTTGCCAAGCGCTTGCGCAGCGAAGTGGTTGAGCAGAAGGCAA
GCTTTCTAGACCAT

BO29601.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:44:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG14367-RA 933 CG14367-PA 1..930 17..946 4650 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:44:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG14367-RA 1204 CG14367-RA 1..930 17..946 4650 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:44:47
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 13694782..13695239 489..946 2290 100 Plus
3R 32079331 3R 13694208..13694423 118..333 1065 99.5 Plus
3R 32079331 3R 13694471..13694635 326..490 825 100 Plus
3R 32079331 3R 13694053..13694155 17..119 515 100 Plus
Blast to na_te.dros performed 2014-11-28 04:44:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dbuz\Osvaldo 9045 Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). 1923..1998 185..259 116 63.2 Plus

BO29601.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:00:34 Download gff for BO29601.complete
Subject Subject Range Query Range Percent Splice Strand
CG14367-RA 1..930 17..948 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:00 Download gff for BO29601.complete
Subject Subject Range Query Range Percent Splice Strand
CG14367-RA 1..930 17..948 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:56:20 Download gff for BO29601.complete
Subject Subject Range Query Range Percent Splice Strand
CG14367-RA 1..930 17..948 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:56:20 Download gff for BO29601.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13694053..13694155 17..119 100 -> Plus
3R 13694210..13694418 120..328 100 -> Plus
3R 13694474..13694634 329..489 100 -> Plus
3R 13694783..13695239 490..948 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:00 Download gff for BO29601.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 9519775..9519877 17..119 100 -> Plus
arm_3R 9519932..9520140 120..328 100 -> Plus
arm_3R 9520196..9520356 329..489 100 -> Plus
arm_3R 9520505..9520961 490..948 99   Plus

BO29601.pep Sequence

Translation from 16 to 964

> BO29601.pep
MSVEDSWVFDSLVCFLHGPIWNAPLQTFIEQKSLVFDPNQQLDENNPDIL
QIHEEYKNLVDYMLGSFMEEMQISPEQFEMACLEGRQQGQGENPFHFHQV
LFQQIWAANDLKIFIRMMTQRNVELQLQALDLIEKNQLAPGGVEEGDDRS
ADASSDPGDTASEVEQMIAKTVSDELESPEAALTPEQEPNLELVNDKFQR
LNLFFEQEDRVDPSDVVSRQEYLRQQRDKIVEIKKQTRAKQLQETMSRGT
PHAPEGARPSSALVAQQLLENGGQTKELSMPAPLEAEENAALQLRRNLAK
RLRSEVVEQKASFLDH

BO29601.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:12:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG14367-PA 310 CG14367-PA 1..310 1..310 1587 100 Plus