BO29601.complete Sequence
964 bp assembled on 2012-04-24
GenBank Submission: KX795642
> BO29601.complete
GAAGTTATCAGTCGACATGTCGGTGGAAGACTCCTGGGTTTTCGATTCGC
TGGTGTGCTTCCTGCACGGGCCCATTTGGAATGCTCCGCTTCAGACGTTC
ATAGAGCAAAAGTCCTTAGTCTTCGATCCCAACCAGCAGTTGGATGAGAA
CAATCCGGACATACTGCAGATACACGAGGAATACAAGAATCTGGTGGACT
ACATGCTCGGCAGCTTCATGGAGGAGATGCAGATATCACCGGAGCAGTTC
GAAATGGCCTGTCTGGAGGGTAGGCAGCAGGGTCAGGGCGAGAATCCCTT
TCATTTCCACCAGGTGCTTTTCCAGCAGATATGGGCCGCCAACGATCTGA
AGATATTCATACGGATGATGACGCAACGCAACGTGGAGCTTCAGCTGCAG
GCCCTGGATCTCATAGAGAAAAATCAATTAGCCCCTGGTGGCGTCGAGGA
GGGGGATGACCGCAGTGCGGACGCTAGCTCGGATCCAGGGGATACCGCCT
CCGAGGTGGAACAAATGATAGCCAAGACGGTGTCTGACGAACTGGAGAGC
CCCGAAGCGGCCCTAACTCCAGAGCAGGAGCCCAATCTGGAGCTGGTTAA
CGACAAGTTCCAGCGCCTGAATCTGTTCTTCGAGCAGGAGGATCGTGTGG
ACCCCAGTGATGTTGTCTCGCGGCAGGAGTACCTGCGCCAACAGCGTGAC
AAGATTGTGGAGATAAAGAAGCAGACGCGTGCAAAGCAACTGCAAGAGAC
CATGTCCCGCGGTACTCCACATGCACCGGAAGGAGCACGTCCCAGCTCCG
CGTTGGTGGCCCAACAGCTGCTCGAGAATGGCGGCCAGACTAAGGAGCTC
TCCATGCCGGCACCACTAGAAGCTGAGGAGAACGCTGCCCTGCAGCTCAG
ACGCAATCTTGCCAAGCGCTTGCGCAGCGAAGTGGTTGAGCAGAAGGCAA
GCTTTCTAGACCAT
BO29601.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:44:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14367-RA | 933 | CG14367-PA | 1..930 | 17..946 | 4650 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:44:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14367-RA | 1204 | CG14367-RA | 1..930 | 17..946 | 4650 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:44:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 13694782..13695239 | 489..946 | 2290 | 100 | Plus |
3R | 32079331 | 3R | 13694208..13694423 | 118..333 | 1065 | 99.5 | Plus |
3R | 32079331 | 3R | 13694471..13694635 | 326..490 | 825 | 100 | Plus |
3R | 32079331 | 3R | 13694053..13694155 | 17..119 | 515 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 04:44:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 1923..1998 | 185..259 | 116 | 63.2 | Plus |
BO29601.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:00:34 Download gff for
BO29601.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14367-RA | 1..930 | 17..948 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:00 Download gff for
BO29601.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14367-RA | 1..930 | 17..948 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:56:20 Download gff for
BO29601.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14367-RA | 1..930 | 17..948 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:56:20 Download gff for
BO29601.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 13694053..13694155 | 17..119 | 100 | -> | Plus |
3R | 13694210..13694418 | 120..328 | 100 | -> | Plus |
3R | 13694474..13694634 | 329..489 | 100 | -> | Plus |
3R | 13694783..13695239 | 490..948 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:00 Download gff for
BO29601.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 9519775..9519877 | 17..119 | 100 | -> | Plus |
arm_3R | 9519932..9520140 | 120..328 | 100 | -> | Plus |
arm_3R | 9520196..9520356 | 329..489 | 100 | -> | Plus |
arm_3R | 9520505..9520961 | 490..948 | 99 | | Plus |
BO29601.pep Sequence
Translation from 16 to 964
> BO29601.pep
MSVEDSWVFDSLVCFLHGPIWNAPLQTFIEQKSLVFDPNQQLDENNPDIL
QIHEEYKNLVDYMLGSFMEEMQISPEQFEMACLEGRQQGQGENPFHFHQV
LFQQIWAANDLKIFIRMMTQRNVELQLQALDLIEKNQLAPGGVEEGDDRS
ADASSDPGDTASEVEQMIAKTVSDELESPEAALTPEQEPNLELVNDKFQR
LNLFFEQEDRVDPSDVVSRQEYLRQQRDKIVEIKKQTRAKQLQETMSRGT
PHAPEGARPSSALVAQQLLENGGQTKELSMPAPLEAEENAALQLRRNLAK
RLRSEVVEQKASFLDH
BO29601.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:12:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14367-PA | 310 | CG14367-PA | 1..310 | 1..310 | 1587 | 100 | Plus |