BO29606.complete Sequence
856 bp assembled on 2011-09-15
> BO29606.complete
GAAGTTATCAGTCGACATGAAGAGCCAACCCATCCTGATTCTGGCCGTGT
GCCTCTTGGCCCTCTCCGCCGTTTCCGCCATGCCACAGCGTCGGGCGAAG
AGTCAACGCCAGGTGGAGTACTCATCCACACCCTATCCGGCTGCTGGCTT
CCGCCCCAGGGTTCCCTTTAATCTGCCCGGTGAAGTTCAACCCAAGATCG
AGACGGAACCACTGACCACCACCAGTACCACGTCTGCCAGCGAAGTGGAA
ACCCTGGAGAATACCGAGCCACTTAGCACCACCGAGCAGCAGCAGCCGGA
AGCGGGAACGGTAGCGGATTTGGAATTGTCCATCCGCACGCCTGCCAATA
CCTACGGAGCCCCTGAAGAGCAGGATCCCCTCGTGCCGGACACCGTAGTG
GTGGTGGCCCAGGAGCCAGCCCGCGACTTTCAGCCCCCCTCCCTGGATGC
CGTCGAGGACTTTGCCGCCGATGTCACTGTTGCTGCTGATGGCGAGCAGC
CTGTTGCTGATGTCCCTGCCCTGGGCCAAGCGGAGTCGGAGGACGATGAG
CCCGAGGCGGCGGTCAAGGCTGTCACCCCGGCTGGAGCCTATGGACCACC
CGCCGCCACCTACGGTGTGCCTGAGCTGAGCGAGACCGAGAACGAGTTGG
ATCTGGAGGAGTCGCAAGTTGAGCTGGTTGAAGAGGAGGCGGCGGCGGAG
GAGGCGCTGACCAACGAGCTCTCTAGTGGTCGCCTGATCCTCCTGCCCTT
GGGCGCCAGGGGAACACAGTTTGGTCGCCTCATCCTTGCCGTGGAGCAAC
CACGCCAGCGCCTGAGGAGCGAACGACTCAGGCGGATTGCAAGCTTTCTA
GACCAT
BO29606.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:44:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14564-RA | 825 | CG14564-PA | 1..822 | 17..838 | 4110 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:44:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14564-RA | 890 | CG14564-RA | 1..822 | 17..838 | 4110 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:44:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 21757155..21757978 | 15..838 | 4120 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 07:44:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6781..6837 | 519..463 | 114 | 66.7 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6783 | 519..463 | 112 | 70 | Minus |
BO29606.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-15 17:46:03 Download gff for
BO29606.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14564-RA | 1..822 | 17..840 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:21:41 Download gff for
BO29606.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14564-RA | 1..822 | 17..840 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:16:10 Download gff for
BO29606.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14564-RA | 1..822 | 17..840 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:16:10 Download gff for
BO29606.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 21757157..21757978 | 17..840 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:21:41 Download gff for
BO29606.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 21750257..21751078 | 17..840 | 99 | | Plus |
BO29606.pep Sequence
Translation from 16 to 856
> BO29606.pep
MKSQPILILAVCLLALSAVSAMPQRRAKSQRQVEYSSTPYPAAGFRPRVP
FNLPGEVQPKIETEPLTTTSTTSASEVETLENTEPLSTTEQQQPEAGTVA
DLELSIRTPANTYGAPEEQDPLVPDTVVVVAQEPARDFQPPSLDAVEDFA
ADVTVAADGEQPVADVPALGQAESEDDEPEAAVKAVTPAGAYGPPAATYG
VPELSETENELDLEESQVELVEEEAAAEEALTNELSSGRLILLPLGARGT
QFGRLILAVEQPRQRLRSERLRRIASFLDH
BO29606.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:19:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14564-PA | 274 | CG14564-PA | 1..274 | 1..274 | 1362 | 100 | Plus |