Clone BO29606 Report

Search the DGRC for BO29606

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:296
Well:6
Vector:pDNR-Dual
Protein status:BO29606.pep: Imported from assembly
Sequenced Size:856

Clone Sequence Records

BO29606.complete Sequence

856 bp assembled on 2011-09-15

> BO29606.complete
GAAGTTATCAGTCGACATGAAGAGCCAACCCATCCTGATTCTGGCCGTGT
GCCTCTTGGCCCTCTCCGCCGTTTCCGCCATGCCACAGCGTCGGGCGAAG
AGTCAACGCCAGGTGGAGTACTCATCCACACCCTATCCGGCTGCTGGCTT
CCGCCCCAGGGTTCCCTTTAATCTGCCCGGTGAAGTTCAACCCAAGATCG
AGACGGAACCACTGACCACCACCAGTACCACGTCTGCCAGCGAAGTGGAA
ACCCTGGAGAATACCGAGCCACTTAGCACCACCGAGCAGCAGCAGCCGGA
AGCGGGAACGGTAGCGGATTTGGAATTGTCCATCCGCACGCCTGCCAATA
CCTACGGAGCCCCTGAAGAGCAGGATCCCCTCGTGCCGGACACCGTAGTG
GTGGTGGCCCAGGAGCCAGCCCGCGACTTTCAGCCCCCCTCCCTGGATGC
CGTCGAGGACTTTGCCGCCGATGTCACTGTTGCTGCTGATGGCGAGCAGC
CTGTTGCTGATGTCCCTGCCCTGGGCCAAGCGGAGTCGGAGGACGATGAG
CCCGAGGCGGCGGTCAAGGCTGTCACCCCGGCTGGAGCCTATGGACCACC
CGCCGCCACCTACGGTGTGCCTGAGCTGAGCGAGACCGAGAACGAGTTGG
ATCTGGAGGAGTCGCAAGTTGAGCTGGTTGAAGAGGAGGCGGCGGCGGAG
GAGGCGCTGACCAACGAGCTCTCTAGTGGTCGCCTGATCCTCCTGCCCTT
GGGCGCCAGGGGAACACAGTTTGGTCGCCTCATCCTTGCCGTGGAGCAAC
CACGCCAGCGCCTGAGGAGCGAACGACTCAGGCGGATTGCAAGCTTTCTA
GACCAT

BO29606.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:44:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG14564-RA 825 CG14564-PA 1..822 17..838 4110 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:44:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG14564-RA 890 CG14564-RA 1..822 17..838 4110 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:44:33
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21757155..21757978 15..838 4120 100 Plus
Blast to na_te.dros performed 2014-11-27 07:44:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6781..6837 519..463 114 66.7 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6724..6783 519..463 112 70 Minus

BO29606.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-15 17:46:03 Download gff for BO29606.complete
Subject Subject Range Query Range Percent Splice Strand
CG14564-RA 1..822 17..840 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:21:41 Download gff for BO29606.complete
Subject Subject Range Query Range Percent Splice Strand
CG14564-RA 1..822 17..840 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:16:10 Download gff for BO29606.complete
Subject Subject Range Query Range Percent Splice Strand
CG14564-RA 1..822 17..840 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:16:10 Download gff for BO29606.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21757157..21757978 17..840 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:21:41 Download gff for BO29606.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21750257..21751078 17..840 99   Plus

BO29606.pep Sequence

Translation from 16 to 856

> BO29606.pep
MKSQPILILAVCLLALSAVSAMPQRRAKSQRQVEYSSTPYPAAGFRPRVP
FNLPGEVQPKIETEPLTTTSTTSASEVETLENTEPLSTTEQQQPEAGTVA
DLELSIRTPANTYGAPEEQDPLVPDTVVVVAQEPARDFQPPSLDAVEDFA
ADVTVAADGEQPVADVPALGQAESEDDEPEAAVKAVTPAGAYGPPAATYG
VPELSETENELDLEESQVELVEEEAAAEEALTNELSSGRLILLPLGARGT
QFGRLILAVEQPRQRLRSERLRRIASFLDH

BO29606.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:19:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG14564-PA 274 CG14564-PA 1..274 1..274 1362 100 Plus