BO29701.complete Sequence
571 bp assembled on 2011-08-31
GenBank Submission: KX794835
> BO29701.complete
GAAGTTATCAGTCGACATGAGTGACTTCAGCATCGAGTATATTTTGAACC
GAGCCGGCGACAGATACGTGGGCACCAATGCCTCCTTGGGCGTCCTGCAG
CGACTCCGTGCCAGCTTGCCTTTCCATCCGTACGCCCACCCAGCATCTTA
TGTCTCAAAGGAGTCTGGAGGATCTCCTCCAGCCTCGGCTGCGGAGGCTC
AGATACCCGTCTACGATTGGCTGCAGTACACCCGGTACCATCCGCCCAAG
TTGCCCAGAGCCCTCCGCCAAAATGCGCCCGCCAAAAGGACTCCTGGTCG
CCTGCCCCGCATCCCATTTACTCCGCAGCAGCTGCAGGCCCTGGAAAATG
CCTACAAGGAGTCCAACTATCTGAGCGCCGAGGACGCCAACAAACTAGCC
GACTCCTTGGAGCTGACCAATACGCGAGTGAAGATCTGGTTCCAGAATCG
TAGGGCTCGCGAGCGACGGGAGAAGCGCGAAAAGGACGAGAGTTGCGACT
CCACCTTCTCATCGAACGCCTCCAGTCCGGAACCGGAAATGATCGTTGTA
ACGGCAAGCTTTCTAGACCAT
BO29701.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:28:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15696-RA | 540 | CG15696-PA | 1..537 | 17..553 | 2625 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:28:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15696-RA | 681 | CG15696-RA | 44..580 | 17..553 | 2625 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:28:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20847111..20847647 | 17..553 | 2625 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:28:25 has no hits.
BO29701.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-31 16:14:00 Download gff for
BO29701.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15696-RA | 1..537 | 17..555 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:54:48 Download gff for
BO29701.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15696-RA | 44..580 | 17..555 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:26:17 Download gff for
BO29701.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15696-RA | 44..580 | 17..555 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:26:17 Download gff for
BO29701.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20847111..20847647 | 17..555 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:54:48 Download gff for
BO29701.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16672833..16673369 | 17..555 | 98 | | Plus |
BO29701.pep Sequence
Translation from 16 to 571
> BO29701.pep
MSDFSIEYILNRAGDRYVGTNASLGVLQRLRASLPFHPYAHPASYVSKES
GGSPPASAAEAQIPVYDWLQYTRYHPPKLPRALRQNAPAKRTPGRLPRIP
FTPQQLQALENAYKESNYLSAEDANKLADSLELTNTRVKIWFQNRRARER
REKREKDESCDSTFSSNASSPEPEMIVVTASFLDH
BO29701.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:04:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15696-PA | 179 | CG15696-PA | 1..179 | 1..179 | 932 | 100 | Plus |
| Dr-PA | 515 | CG1897-PA | 408..478 | 76..151 | 178 | 48.7 | Plus |
| E5-PA | 524 | CG9930-PA | 251..379 | 37..170 | 161 | 33.1 | Plus |
| ems-PA | 494 | CG2988-PA | 349..452 | 54..158 | 158 | 33.6 | Plus |
| scro-PF | 307 | CG17594-PF | 93..169 | 95..171 | 148 | 41.6 | Plus |
