BO29903.complete Sequence
544 bp assembled on 2012-04-24
GenBank Submission: KX799684
> BO29903.complete
GAAGTTATCAGTCGACATGGTTGGACTCAAGTTTCCGTCGAACCGAACAC
TGGGCAATATTTGTGTCTACGGTGCGGTGGCCTCCATATCCGCTGTGATG
TACATGAAATGGAAGATGGAGGATCGGGTGAAATCCGCAGAGTACTACAA
ACTGGCCTTGAAGGCACTGCGGAGCCATCGAGGAGCAGTTGGTCTCCTGG
GTGAACCCATCAAGGACTCTGGCATCGATCTGTCCAACGCCAACAACAAT
TGCAATGCGGAGGAGGCGCGTTGTGAGGTGGCTGTGCGGGGCAGCAAGGA
TAAAGGAACTTTATACTTTTGGGCGTCCAATCAGCCGGATAGAGGCTGGC
TGATCGATCGACTGGAGCTGGAAACAAAACTCAACCCAGAGAAACGATTT
TTGCTTAAAAAATCCGAGGAACTAACCTTCGATCTGCCCGAGAGTATAAC
CAAACAAACTGCCCAGCAAGTTGATTCCAATGTCATTCTATCCGCATCGG
ATCAACAACCAGAAACACATTCAAAGGCAAGCTTTCTAGACCAT
BO29903.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:46:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15653-RA | 513 | CG15653-PA | 1..510 | 17..526 | 2550 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:46:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15653-RA | 711 | CG15653-RA | 80..589 | 17..526 | 2550 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:46:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21060179..21060468 | 306..17 | 1450 | 100 | Minus |
| 2R | 25286936 | 2R | 21059902..21060124 | 526..304 | 1115 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:46:02 has no hits.
BO29903.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:00:39 Download gff for
BO29903.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15653-RA | 42..551 | 17..528 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:13 Download gff for
BO29903.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15653-RA | 80..589 | 17..528 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:56:46 Download gff for
BO29903.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15653-RA | 80..589 | 17..528 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:56:46 Download gff for
BO29903.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21059899..21060122 | 306..528 | 99 | <- | Minus |
| 2R | 21060180..21060468 | 17..305 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:13 Download gff for
BO29903.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16947404..16947627 | 306..528 | 99 | <- | Minus |
| arm_2R | 16947685..16947973 | 17..305 | 100 | | Minus |
BO29903.pep Sequence
Translation from 16 to 544
> BO29903.pep
MVGLKFPSNRTLGNICVYGAVASISAVMYMKWKMEDRVKSAEYYKLALKA
LRSHRGAVGLLGEPIKDSGIDLSNANNNCNAEEARCEVAVRGSKDKGTLY
FWASNQPDRGWLIDRLELETKLNPEKRFLLKKSEELTFDLPESITKQTAQ
QVDSNVILSASDQQPETHSKASFLDH
BO29903.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:12:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15653-PA | 170 | CG15653-PA | 1..170 | 1..170 | 877 | 100 | Plus |
| CG31913-PA | 215 | CG31913-PA | 11..165 | 7..167 | 441 | 51.6 | Plus |
