BO29908.complete Sequence
460 bp assembled on 2012-04-24
GenBank Submission: KX796828
> BO29908.complete
GAAGTTATCAGTCGACATGGCAAAGTTTTTGGGCATCAACCGGCTGACAA
AGCTGTTCCAGATGGTCCGCGAAGCCGGAGGACTGAAGCAAGCGTACCTG
AAGCTCTATAGGAACGATGATCTGAAGATCGGAACCCTGGTGGGCATCGA
CAAGTACGGCAACAAGTACTTCGAGAACCCGTACTACTTCTACGGCCGCA
ATCGCTGGATCGAGTTCGCCCCCCACGTCAACATGGACTACGATGGATCC
ATGATTCCCGCCGAGTGGTACGGCTGGATGCACTACAAGACCGATCTGCC
TCCCATTCGCGATGGATGCCGCCCCAAGTACAAGTGGATAGCGGACCACA
GCGAGAATCTTTCCGGAACTAAGGAGGCCTACTACCCCTACTCCACAACA
CCCAACAAAGTGGAGGCCTGGGAACCCAAGGCGAAGAAGCAGGCAAGCTT
TCTAGACCAT
BO29908.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:50:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3214-RB | 429 | CG3214-PB | 1..426 | 17..442 | 2130 | 100 | Plus |
CG3214-RA | 429 | CG3214-PA | 1..426 | 17..442 | 2130 | 100 | Plus |
CG3214-RC | 429 | CG3214-PC | 1..426 | 17..442 | 2130 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:50:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3214-RB | 618 | CG3214-RB | 33..460 | 15..442 | 2140 | 100 | Plus |
CG3214-RA | 621 | CG3214-RA | 93..519 | 16..442 | 2135 | 100 | Plus |
CG3214-RC | 677 | CG3214-RC | 149..575 | 16..442 | 2135 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:50:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2579619..2579798 | 289..110 | 900 | 100 | Minus |
2L | 23513712 | 2L | 2579859..2579955 | 112..16 | 485 | 100 | Minus |
2L | 23513712 | 2L | 2579483..2579569 | 374..288 | 435 | 100 | Minus |
2L | 23513712 | 2L | 2579359..2579427 | 442..374 | 345 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:50:54 has no hits.
BO29908.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:00:58 Download gff for
BO29908.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3214-RB | 44..469 | 17..444 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:13 Download gff for
BO29908.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3214-RB | 35..460 | 17..444 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:58:53 Download gff for
BO29908.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3214-RB | 35..460 | 17..444 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:58:53 Download gff for
BO29908.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2579357..2579426 | 375..444 | 97 | <- | Minus |
2L | 2579483..2579567 | 290..374 | 100 | <- | Minus |
2L | 2579619..2579796 | 112..289 | 100 | <- | Minus |
2L | 2579860..2579954 | 17..111 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:13 Download gff for
BO29908.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2579357..2579426 | 375..444 | 97 | <- | Minus |
arm_2L | 2579483..2579567 | 290..374 | 100 | <- | Minus |
arm_2L | 2579619..2579796 | 112..289 | 100 | <- | Minus |
arm_2L | 2579860..2579954 | 17..111 | 100 | | Minus |
BO29908.pep Sequence
Translation from 16 to 460
> BO29908.pep
MAKFLGINRLTKLFQMVREAGGLKQAYLKLYRNDDLKIGTLVGIDKYGNK
YFENPYYFYGRNRWIEFAPHVNMDYDGSMIPAEWYGWMHYKTDLPPIRDG
CRPKYKWIADHSENLSGTKEAYYPYSTTPNKVEAWEPKAKKQASFLDH
BO29908.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:14:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3214-PB | 142 | CG3214-PB | 1..142 | 1..142 | 797 | 100 | Plus |
CG3214-PA | 142 | CG3214-PA | 1..142 | 1..142 | 797 | 100 | Plus |
CG3214-PC | 142 | CG3214-PC | 1..142 | 1..142 | 797 | 100 | Plus |