Clone BO29922 Report

Search the DGRC for BO29922

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:299
Well:22
Vector:pDNR-Dual
Associated Gene/TranscriptCG34329-RA
Protein status:BO29922.pep: Imported from assembly
Sequenced Size:397

Clone Sequence Records

BO29922.complete Sequence

397 bp assembled on 2012-04-24

GenBank Submission: KX794761

> BO29922.complete
GAAGTTATCAGTCGACATGCGAGCGGTTTCGGTGTCAGTGCTACTCATCC
TTGTTGTCTGGGTGTCCTGTTTCGGCGAATCAGGCGCAGATTGCTGCTGG
ACAAAGGCCAAGCTGCTCTTCACGATGGGCACAGGATCGTGCGGAATGGT
CAATGCCAAGACCACCAAATACGGATGCGAGGCCACAGTTTGCGCGGATG
GAAGAGTGCTCAAGGGCACATATTGTGGCGTGGGTTCGTGCAATATCATT
GGATGCTTTTGTCGCGGCGGCTGTCTCACTGGAAACTATGGCGAGTCATT
TGTGGAAATAAATAATAGGTATCAGATCAACTTGATAAGCACCCAAATGA
GGCTTGCCAATTTAACAGATACCGAGGCCGCAAGCTTTCTAGACCAT

BO29922.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:46:08
Subject Length Description Subject Range Query Range Score Percent Strand
Diedel3-RB 366 CG34329-PB 1..363 17..379 1815 100 Plus
Diedel3-RA 366 CG34329-PA 1..363 17..379 1815 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:46:09
Subject Length Description Subject Range Query Range Score Percent Strand
Diedel3-RB 2719 CG34329-RB 32..394 17..379 1815 100 Plus
Diedel3-RA 534 CG34329-RA 32..394 17..379 1815 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:46:05
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19050473..19050835 17..379 1815 100 Plus
Blast to na_te.dros performed on 2014-11-28 04:46:07 has no hits.

BO29922.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:00:40 Download gff for BO29922.complete
Subject Subject Range Query Range Percent Splice Strand
CG34329-RA 1..363 17..381 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:15 Download gff for BO29922.complete
Subject Subject Range Query Range Percent Splice Strand
Diedel3-RA 1..363 17..381 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:56:47 Download gff for BO29922.complete
Subject Subject Range Query Range Percent Splice Strand
Diedel3-RA 32..394 17..381 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:56:47 Download gff for BO29922.complete
Subject Subject Range Query Range Percent Splice Strand
X 19050473..19050835 17..381 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:15 Download gff for BO29922.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 18944506..18944868 17..381 99   Plus

BO29922.pep Sequence

Translation from 16 to 397

> BO29922.pep
MRAVSVSVLLILVVWVSCFGESGADCCWTKAKLLFTMGTGSCGMVNAKTT
KYGCEATVCADGRVLKGTYCGVGSCNIIGCFCRGGCLTGNYGESFVEINN
RYQINLISTQMRLANLTDTEAASFLDH

BO29922.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:12:34
Subject Length Description Subject Range Query Range Score Percent Strand
Diedel3-PB 121 CG34329-PB 1..121 1..121 655 100 Plus
Diedel3-PA 121 CG34329-PA 1..121 1..121 655 100 Plus
Diedel2-PA 125 CG43228-PA 4..105 9..110 226 37.3 Plus
Diedel-PA 115 CG11501-PA 1..108 1..107 225 40.7 Plus