BO29928.complete Sequence
538 bp assembled on 2012-04-24
GenBank Submission: KX800139
> BO29928.complete
GAAGTTATCAGTCGACATGTACATAGCCGGGCTGGCCGGTTTGGGCTTAA
TAGTTTTGGTATCGATCTACAAATGTGCCAGTGGCGAGGTTCGCCAGGCG
GAAAGCGAAAAGTGCTTCTTCTGCGACTTCGCCCACCGCCGCCAAGGACC
GCCGCCCATCCTGGAGGTGGAGACGGACGAGTACGTGATCTTCAAGGACA
AGTATCCGGCAGCCAGACTCCACTATCTGGCGATTCCCAAGGAGCACTTC
GACAGCCTGAAAGCGCTGAACAAATCGCACGTTGGATTGGTGCGGCGAAT
GGAGCAGGGCATGATGGAATTCCTGCGATCGCAGAACGTGGATCCCAAGG
AGGCGATTGTGGGCTTCCACTTGCCGCCGTTCATCTCGGTTCGCCACCTC
CACCTGCACGGCATTTTCCCGCCTGCCGACATGAGTTTCGGCAACAAGAT
CAGCTTTATGCCCTCATTCTGGTTCAAAAAGTCCAGTGATGCGATTCGGG
AATTGGAGGACCGGGAACTGGCAAGCTTTCTAGACCAT
BO29928.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:46:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15362-RA | 507 | CG15362-PA | 1..504 | 17..520 | 2520 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:46:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15362-RA | 813 | CG15362-RA | 135..638 | 17..520 | 2520 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:46:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1981310..1981583 | 17..290 | 1370 | 100 | Plus |
| 2L | 23513712 | 2L | 1981641..1981832 | 290..481 | 960 | 100 | Plus |
| 2L | 23513712 | 2L | 1981884..1981924 | 480..520 | 205 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:46:53 has no hits.
BO29928.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:00:42 Download gff for
BO29928.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15362-RA | 1..504 | 17..522 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:25 Download gff for
BO29928.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15362-RA | 135..638 | 17..522 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:57:09 Download gff for
BO29928.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15362-RA | 135..638 | 17..522 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:57:09 Download gff for
BO29928.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1981310..1981583 | 17..290 | 100 | -> | Plus |
| 2L | 1981642..1981832 | 291..481 | 100 | -> | Plus |
| 2L | 1981886..1981924 | 482..522 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:25 Download gff for
BO29928.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1981310..1981583 | 17..290 | 100 | -> | Plus |
| arm_2L | 1981642..1981832 | 291..481 | 100 | -> | Plus |
| arm_2L | 1981886..1981924 | 482..522 | 95 | | Plus |
BO29928.pep Sequence
Translation from 16 to 538
> BO29928.pep
MYIAGLAGLGLIVLVSIYKCASGEVRQAESEKCFFCDFAHRRQGPPPILE
VETDEYVIFKDKYPAARLHYLAIPKEHFDSLKALNKSHVGLVRRMEQGMM
EFLRSQNVDPKEAIVGFHLPPFISVRHLHLHGIFPPADMSFGNKISFMPS
FWFKKSSDAIRELEDRELASFLDH
BO29928.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:12:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15362-PA | 168 | CG15362-PA | 1..168 | 1..168 | 887 | 100 | Plus |
| CG34015-PA | 139 | CG34015-PA | 4..139 | 31..167 | 330 | 47.4 | Plus |
