BO29929.complete Sequence
451 bp assembled on 2012-04-24
GenBank Submission: KX797172
> BO29929.complete
GAAGTTATCAGTCGACATGGGTGGCAAAAGTTATTATTGCGACTACTGCT
GTTGCTTTCTGAAAAACGATCTGAATGTGAGGAAATTGCACAATGGTGGT
ATTGCACACGCAATTGCAAAGAGCAACTATTTGAAGCGTTACGAGGATCC
CAAAAAGATTTTGACTGAAGAGCGGCAGAAAACTCCTTGCAAGCGATACT
TTGGCAGTTACTGCAAGTTTGAAACATATTGCAAGTTTACCCACTATAGT
GGCGATAATCTACGGGAACTGGAGAAGTTGGTTCTCGCTAGAAAGAAGAG
AAAATCCCGAAAGAAAACCAACAAATGCAAGAGATGGCCCTGGAAAACTC
ATCTGCGAAAGGGATTACCCCCTTCCTTGCAACCCATTAACCCGGAAAAA
CTCAAGCAAACCGACTTTGAACTCAGTTGGGGCGCAAGCTTTCTAGACCA
T
BO29929.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:47:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31922-RA | 420 | CG31922-PA | 1..417 | 17..433 | 2085 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:47:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31922-RA | 497 | CG31922-RA | 54..470 | 17..433 | 2085 | 100 | Plus |
Plap-RC | 2746 | CG5105-RC | 3..132 | 146..17 | 650 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:47:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 1170610..1170762 | 281..433 | 765 | 100 | Plus |
2L | 23513712 | 2L | 1170418..1170553 | 146..281 | 680 | 100 | Plus |
2L | 23513712 | 2L | 1170234..1170363 | 17..146 | 650 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:47:07 has no hits.
BO29929.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:00:43 Download gff for
BO29929.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31922-RA | 54..470 | 17..435 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:27 Download gff for
BO29929.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31922-RA | 54..470 | 17..435 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:57:17 Download gff for
BO29929.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31922-RA | 54..470 | 17..435 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:57:17 Download gff for
BO29929.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 1170234..1170363 | 17..146 | 100 | -> | Plus |
2L | 1170419..1170553 | 147..281 | 100 | -> | Plus |
2L | 1170611..1170762 | 282..435 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:27 Download gff for
BO29929.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 1170419..1170553 | 147..281 | 100 | -> | Plus |
arm_2L | 1170611..1170762 | 282..435 | 98 | | Plus |
arm_2L | 1170234..1170363 | 17..146 | 100 | -> | Plus |
BO29929.pep Sequence
Translation from 16 to 451
> BO29929.pep
MGGKSYYCDYCCCFLKNDLNVRKLHNGGIAHAIAKSNYLKRYEDPKKILT
EERQKTPCKRYFGSYCKFETYCKFTHYSGDNLRELEKLVLARKKRKSRKK
TNKCKRWPWKTHLRKGLPPSLQPINPEKLKQTDFELSWGASFLDH
BO29929.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:12:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31922-PA | 139 | CG31922-PA | 1..139 | 1..139 | 783 | 100 | Plus |