BO29931.complete Sequence
451 bp assembled on 2012-04-24
GenBank Submission: KX796615
> BO29931.complete
GAAGTTATCAGTCGACATGTCCCGATACTCCATGAAAGGCATCAATTTCG
ATGTTAAACGCGATATACAAAAGGTGGATGCTCGCACCTACGGATTCCTG
AAGACCAAGGGATCAGATACGCCGATGCCCACGGCTGCGAAGAGAATTAA
TCAATCGACGTTGATCGAAAGATTGAAATCCATAACATTGGCTGAAGTGG
TGGACGAGGAAGATCAGTCGTCTACGGGTTCAGTGGAATCGGGTAGCATG
TCCTTCGAAATGAAACGGAAGCTATTTGACGCAGCCGAGTTCACCATCAC
CCGAGGTCAGAAACTGAGTGACCTCACGCATGCCGCTGATGAGGGGATTA
ACTTTAGTCCGTACGATACCGGCAACAAGACACTCGAAGAAATCGAGGAA
TACTGCCGCGCCGTCAACATTAAGTTTGCCAAAGCAAGCTTTCTAGACCA
T
BO29931.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:47:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5509-RA | 420 | CG5509-PA | 1..417 | 17..433 | 2085 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:47:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5509-RA | 733 | CG5509-RA | 73..489 | 17..433 | 2085 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:47:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 12452536..12452952 | 17..433 | 2085 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:47:27 has no hits.
BO29931.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:00:44 Download gff for
BO29931.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5509-RA | 73..489 | 17..435 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:32 Download gff for
BO29931.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5509-RA | 73..489 | 17..435 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:57:25 Download gff for
BO29931.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5509-RA | 73..489 | 17..435 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:57:25 Download gff for
BO29931.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 12452536..12452952 | 17..435 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:32 Download gff for
BO29931.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 8278258..8278674 | 17..435 | 99 | | Plus |
BO29931.pep Sequence
Translation from 16 to 451
> BO29931.pep
MSRYSMKGINFDVKRDIQKVDARTYGFLKTKGSDTPMPTAAKRINQSTLI
ERLKSITLAEVVDEEDQSSTGSVESGSMSFEMKRKLFDAAEFTITRGQKL
SDLTHAADEGINFSPYDTGNKTLEEIEEYCRAVNIKFAKASFLDH
BO29931.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:12:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5509-PA | 139 | CG5509-PA | 1..139 | 1..139 | 700 | 100 | Plus |
I-t-PA | 184 | CG14719-PA | 47..180 | 23..139 | 167 | 32.8 | Plus |