Clone BO29932 Report

Search the DGRC for BO29932

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:299
Well:32
Vector:pDNR-Dual
Associated Gene/TranscriptCG14903-RA
Protein status:BO29932.pep: Imported from assembly
Sequenced Size:391

Clone Sequence Records

BO29932.complete Sequence

391 bp assembled on 2012-04-24

GenBank Submission: KX797993

> BO29932.complete
GAAGTTATCAGTCGACATGAGTAATATTGTACAGTATATTGTAGTTCGCA
GCGACTTGCGTTCCGCCCTTAGTTGGCCCTTGGGGGCGGTGATCGCTCAG
AGTTGCCATGCCACAGCCGCCGTCATTCACTTGAATTCCGAGGACGCCGA
CACTGTGGCCTACTTGAACGATCTGGATAATATGCACAAAGTGGTGCTGG
AGGCCAAAGATGAGAGTGCTCTGGTCAAGCTCAGTGAAAAGTTAAAGGAG
AACGAGATTAAACACAAGTTGTGGATCGAACAGCCCGAAAATATCCCAAC
CTGCATCGCCTTGAAACCTTATGTTAAGGACACGGTTCATAAATATGTCA
AGCACCTTAAGCTTTTAAAAGAGGCAAGCTTTCTAGACCAT

BO29932.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:47:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG14903-RA 360 CG14903-PA 1..357 17..373 1785 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:47:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG14903-RA 442 CG14903-RA 33..391 15..373 1795 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:47:34
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 16573532..16573720 203..15 945 100 Minus
3R 32079331 3R 16573230..16573402 373..201 865 100 Minus
Blast to na_te.dros performed on 2014-11-28 04:47:35 has no hits.

BO29932.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:00:45 Download gff for BO29932.complete
Subject Subject Range Query Range Percent Splice Strand
CG14903-RA 35..391 17..375 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:34 Download gff for BO29932.complete
Subject Subject Range Query Range Percent Splice Strand
CG14903-RA 35..391 17..375 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:57:27 Download gff for BO29932.complete
Subject Subject Range Query Range Percent Splice Strand
CG14903-RA 35..391 17..375 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:57:27 Download gff for BO29932.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16573228..16573400 203..375 98 <- Minus
3R 16573533..16573718 17..202 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:34 Download gff for BO29932.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12399255..12399440 17..202 100   Minus
arm_3R 12398950..12399122 203..375 98 <- Minus

BO29932.pep Sequence

Translation from 16 to 391

> BO29932.pep
MSNIVQYIVVRSDLRSALSWPLGAVIAQSCHATAAVIHLNSEDADTVAYL
NDLDNMHKVVLEAKDESALVKLSEKLKENEIKHKLWIEQPENIPTCIALK
PYVKDTVHKYVKHLKLLKEASFLDH

BO29932.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:12:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG14903-PA 119 CG14903-PA 1..119 1..119 609 100 Plus