BO29936.complete Sequence
580 bp assembled on 2011-09-15
GenBank Submission: KX794020
> BO29936.complete
GAAGTTATCAGTCGACATGCCGAATCGCGCGACGCGGAAGAAATATCGCC
GGATTCGACTCCACATTTTCCTGGCATTATCCCTATGGTTCCTGATCGAG
GCTCATCCCGTCGAAGGAACACGGTGCAGGAATCCCTATGAGAGGGTACG
GGAAAACTATTGCTACTTCGTTGCTGACGAGGAACCGCTGCACACATCGT
TCCATAACTTTTGCTATCAGGACAAGCGCACCTCACGAGTTTGCCTGGAT
AGTGACGAGGAAATGCGCGTTCTGGCCCATCACCTGGCCAACTTGGGCTA
CCCGAACGGCACGCAGTTCTGGAGCGCCGGGCATCGATGGCCGGGTGATA
ACCGCTTCTACTGGAACTACTTTGGCAGAGCCCGACCGCTCAACTACTCC
AACTGGGCGGTGGACGAGCCGACGCCCCAAATGGGCCGCAATTGCCTGAT
CCTCACTCTCCAGGGTGGAGAACTCATCATGAGCAGTGAGTCCTGCTACA
CCCGAGCGGTCGATATCTGCGAACAGACGCTGAACGGCACGGATTCCCGT
CCCGTAATCCACGCAAGCTTTCTAGACCAT
BO29936.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:39:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13086-RB | 549 | CG13086-PB | 1..546 | 17..562 | 2730 | 100 | Plus |
| CG13086-RA | 549 | CG13086-PA | 1..546 | 17..562 | 2730 | 100 | Plus |
| CG13086-RC | 504 | CG13086-PC | 129..501 | 190..562 | 1865 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:39:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13086-RB | 690 | CG13086-RB | 20..565 | 17..562 | 2730 | 100 | Plus |
| CG13086-RA | 617 | CG13086-RA | 20..565 | 17..562 | 2730 | 100 | Plus |
| CG13086-RC | 572 | CG13086-RC | 148..520 | 190..562 | 1865 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:39:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19364973..19365345 | 190..562 | 1865 | 100 | Plus |
| 2L | 23513712 | 2L | 19364394..19364567 | 17..190 | 870 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:39:53 has no hits.
BO29936.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-15 17:23:11 Download gff for
BO29936.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13086-RA | 1..546 | 17..564 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:19:57 Download gff for
BO29936.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13086-RA | 20..565 | 17..564 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:14:51 Download gff for
BO29936.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13086-RA | 20..565 | 17..564 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:14:51 Download gff for
BO29936.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19364394..19364567 | 17..190 | 100 | -> | Plus |
| 2L | 19364974..19365345 | 191..564 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:19:57 Download gff for
BO29936.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19364394..19364567 | 17..190 | 100 | -> | Plus |
| arm_2L | 19364974..19365345 | 191..564 | 99 | | Plus |
BO29936.pep Sequence
Translation from 16 to 580
> BO29936.pep
MPNRATRKKYRRIRLHIFLALSLWFLIEAHPVEGTRCRNPYERVRENYCY
FVADEEPLHTSFHNFCYQDKRTSRVCLDSDEEMRVLAHHLANLGYPNGTQ
FWSAGHRWPGDNRFYWNYFGRARPLNYSNWAVDEPTPQMGRNCLILTLQG
GELIMSSESCYTRAVDICEQTLNGTDSRPVIHASFLDH
BO29936.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:19:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13086-PB | 182 | CG13086-PB | 1..182 | 1..182 | 1019 | 100 | Plus |
| CG13086-PA | 182 | CG13086-PA | 1..182 | 1..182 | 1019 | 100 | Plus |
| CG13086-PC | 167 | CG13086-PC | 1..167 | 1..182 | 909 | 91.8 | Plus |
