BO29937.complete Sequence
583 bp assembled on 2012-04-24
GenBank Submission: KX798892
> BO29937.complete
GAAGTTATCAGTCGACATGGGCTCCTCTTTATGTCCCGTCTCTTATCTGG
CGGTCTTGGCAATTATCGTCCTAACCAGTAATATTACAGTCCAGGCTAAA
AGGACATTCAGGATCCAGAAATTAGAAAAGGTGACTGAGGATACCTCATA
TCTGCGCAGTCGTCTGCGTATCGCTGAGTCCGAGGAAAATGAGTTGAAAG
TCAGCGGATATCTCGATCTGAATCAACGACTCGACAATGATTGGACGGTT
GTGCTTAAGGTTTCAAGATCCCCGGATAGCGATGGAGACTACGAGAAGGT
TTTGACATTCGAAATGCAGCTTTGCGACTTTATGAAGAGCTACTACAAGG
ATATCTTTTACGAACGGATCAAGGAATACTCGAATGCCCCGCATCCCAGC
AGCTGTCCTCTGCCCAAGGAACGCTATGTACTAGAGGACTATCCCTTCAA
TGTCAAGTTGCTCAAAAAGCTGATGAGTCCGGGCTTCTATCGCATAAAGT
ATACCCTCAAGAATGAAGAGACTAAAATATTATCGTACGTTCTGGATTTG
GAGTTGGAGGAGAACGCAAGCTTTCTAGACCAT
BO29937.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:48:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CheA87a-RA | 552 | CG14379-PA | 1..549 | 17..565 | 2745 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:48:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CheA87a-RA | 643 | CG14379-RA | 22..570 | 17..565 | 2745 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:48:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 13369955..13370273 | 247..565 | 1595 | 100 | Plus |
3R | 32079331 | 3R | 13369669..13369901 | 17..249 | 1165 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:48:16 has no hits.
BO29937.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:00:48 Download gff for
BO29937.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CheA87a-RA | 1..549 | 17..567 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:41 Download gff for
BO29937.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CheA87a-RA | 22..570 | 17..567 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:57:43 Download gff for
BO29937.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CheA87a-RA | 22..570 | 17..567 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:57:43 Download gff for
BO29937.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 13369669..13369899 | 17..247 | 100 | -> | Plus |
3R | 13369956..13370273 | 248..567 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:41 Download gff for
BO29937.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 9195391..9195621 | 17..247 | 100 | -> | Plus |
arm_3R | 9195678..9195995 | 248..567 | 99 | | Plus |
BO29937.pep Sequence
Translation from 16 to 583
> BO29937.pep
MGSSLCPVSYLAVLAIIVLTSNITVQAKRTFRIQKLEKVTEDTSYLRSRL
RIAESEENELKVSGYLDLNQRLDNDWTVVLKVSRSPDSDGDYEKVLTFEM
QLCDFMKSYYKDIFYERIKEYSNAPHPSSCPLPKERYVLEDYPFNVKLLK
KLMSPGFYRIKYTLKNEETKILSYVLDLELEENASFLDH
BO29937.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:13:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CheA87a-PA | 183 | CG14379-PA | 1..183 | 1..183 | 939 | 100 | Plus |