Clone BO29942 Report

Search the DGRC for BO29942

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:299
Well:42
Vector:pDNR-Dual
Associated Gene/TranscriptCG32461-RA
Protein status:BO29942.pep: Imported from assembly
Sequenced Size:790

Clone Sequence Records

BO29942.complete Sequence

790 bp assembled on 2012-04-24

GenBank Submission: KX797697

> BO29942.complete
GAAGTTATCAGTCGACATGGGTAGTATTAATAGTGAAGAGCAAAATGTCG
CTGTATCCGGATGGACAAAATCCAATTCACCGGAATTAATTGAAGAGGAG
CGACTTTACACCGAACTTGACTCGGAAGGTCGGATGATAAGCAGGACTAT
GACGCCATATGAGTGTCAGCTCGAAGGCGAAGTGGAGCAGTTGCAAGAGG
CGCTTTTCAAAATCTCGTCCCATTATGCCAAAGTTCAGTTCGGACTGCGA
CAAATATCCTTGGCTTCAGGTTCCGAGAGGGAAAATCTGTTAAAAGATTT
GGAGCGATTAATAGCAAAAGGACTAGATGCGACTGGTCCCATACGGGGCG
AAAAATTCTCCATGCCAGCCAAACTTCGCGTGAAGCAAGACAAGATTCTT
TGCCAACTGCGTGGAAGTCTCGGAGACTTGGTCGGTGCAACTGGAGTTGG
CTTTCACGCAAATCATTACCCGGCCACAAACAGATCTCTTAAGATTTATA
CAGGTGCTTCCAATAAGACTCCCCGCAGCAAAGGCGTCGGCCAGGATTGT
GGTATAAGCCGAAGATGCATTGGTCATGCAAAGGAAGAAAGCAAACCTGC
CACTGGATACATGAAACGCACCTGTGGTGATTTAAGTACGGAAAGCAAGA
TACACCTTTACCATACCAAGTCAGCCACTTATTCGAAGATTCGCGGTAAT
AGTAAAACAACGGAAGATGGAAAAACTCGTACAAACAATAATTATTTGGA
GCTGTTAAAGTCGAATTTAATTGCAAGCTTTCTAGACCAT

BO29942.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:51:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG32461-RA 759 CG32461-PA 1..756 17..772 3765 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:51:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG32461-RA 882 CG32461-RA 17..773 16..772 3770 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:51:34
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22954530..22955286 772..16 3770 99.9 Minus
Blast to na_te.dros performed on 2014-11-28 04:51:35 has no hits.

BO29942.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:01:00 Download gff for BO29942.complete
Subject Subject Range Query Range Percent Splice Strand
CG32461-RA 18..773 17..774 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:21 Download gff for BO29942.complete
Subject Subject Range Query Range Percent Splice Strand
CG32461-RA 18..773 17..774 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:59:08 Download gff for BO29942.complete
Subject Subject Range Query Range Percent Splice Strand
CG32461-RA 18..773 17..774 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:59:08 Download gff for BO29942.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22954528..22955285 17..774 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:21 Download gff for BO29942.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22947628..22948385 17..774 99   Minus

BO29942.pep Sequence

Translation from 16 to 790

> BO29942.pep
MGSINSEEQNVAVSGWTKSNSPELIEEERLYTELDSEGRMISRTMTPYEC
QLEGEVEQLQEALFKISSHYAKVQFGLRQISLASGSERENLLKDLERLIA
KGLDATGPIRGEKFSMPAKLRVKQDKILCQLRGSLGDLVGATGVGFHANH
YPATNRSLKIYTGASNKTPRSKGVGQDCGISRRCIGHAKEESKPATGYMK
RTCGDLSTESKIHLYHTKSATYSKIRGNSKTTEDGKTRTNNNYLELLKSN
LIASFLDH

BO29942.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:14:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG32461-PA 252 CG32461-PA 1..252 1..252 1297 100 Plus