BO29946.complete Sequence
973 bp assembled on 2012-04-24
GenBank Submission: KX794389
> BO29946.complete
GAAGTTATCAGTCGACATGACAAGTCGCTGGCTGCTATTAAGTTTGCTAC
TCTATTGGGGTAGCCAGGAGGTCTCCTCGGGTGTGATGGACAACTTTGGC
GATGGCTTGAAAATGGCCGGGCAAATGTTTGGCATCAATACGGCAGCAGA
TGTGGCAAATCTGGTAGCCAAGGCATTCTCCGGCAATTCTATGGCAAATG
TACCCAATTTGATTAGCTACGCCCAGAGTGGATTCCAAGGGCTGCGGCAA
AACAATGGTGCGGATGAACAGGAGGAGGATCAATCGGAGCAGCAATCGGA
AACGGAAAATGTCCAGGAAGAACCTCCGGTGGAGAACACAACCCGAAAAC
CTCCTCCGATAACCTTCGATTCCGGGCAAATGCTCTCCAATATGTTGAGA
ATGGTGGGTTTTGATACGCGGAAAATAGGAGCCCTAGCCTTAAATGCATT
GATTATGGTTGCTCAGGCGATTGGTAGCTCCCTGCTGCAGGTTACTCGGG
GAGGTGGAACATCTTTAATCGATGCTACGGAATCCCTGTATGAACCCAGC
GATCATCGACCACGTTCCCTATCCATGGGATCGCCCATCGATTGGTTTAT
GCAACGTACAGATCGCTATAGCAAACGACTAATCAAGGATATCATGGATC
GGGATTTGCCCGACTACATACTAGACATGATCGAAGCCAAGGAACAACCC
GAGGAGGGTAAAACCGCTGGTTGCCTAAAGCTTCTGATGTGCAAGGGTCA
ACCAATCATTTGGGGAATGCAGGAATCGTTAAAGAAACGCCTGGCTGGAG
AACCTGAAGAGCCCGATGATAACGATAGCTACTTTAACAAGAAAATCTTA
TTTAAACACTTGCCCAGTCTTGAGGATTTTAGGAACCATAGTGCTAGCTG
TGAAGTCAAATACCACGAGGAGTGCCCCAAGAATGCAACAACGGGAAGCT
ATTTTGCAAGCTTTCTAGACCAT
BO29946.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:53:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32040-RA | 942 | CG32040-PA | 1..939 | 17..955 | 4695 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:53:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32040-RA | 1364 | CG32040-RA | 304..1242 | 17..955 | 4695 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:53:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 9354849..9355335 | 469..955 | 2435 | 100 | Plus |
3L | 28110227 | 3L | 9354336..9354788 | 17..469 | 2265 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:53:15 has no hits.
BO29946.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:01:04 Download gff for
BO29946.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32040-RA | 304..1242 | 17..957 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:40 Download gff for
BO29946.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32040-RA | 304..1242 | 17..957 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:59:40 Download gff for
BO29946.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32040-RA | 304..1242 | 17..957 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:59:40 Download gff for
BO29946.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 9354336..9354788 | 17..469 | 100 | -> | Plus |
3L | 9354850..9355335 | 470..957 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:40 Download gff for
BO29946.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 9347436..9347888 | 17..469 | 100 | -> | Plus |
arm_3L | 9347950..9348435 | 470..957 | 99 | | Plus |
BO29946.pep Sequence
Translation from 16 to 973
> BO29946.pep
MTSRWLLLSLLLYWGSQEVSSGVMDNFGDGLKMAGQMFGINTAADVANLV
AKAFSGNSMANVPNLISYAQSGFQGLRQNNGADEQEEDQSEQQSETENVQ
EEPPVENTTRKPPPITFDSGQMLSNMLRMVGFDTRKIGALALNALIMVAQ
AIGSSLLQVTRGGGTSLIDATESLYEPSDHRPRSLSMGSPIDWFMQRTDR
YSKRLIKDIMDRDLPDYILDMIEAKEQPEEGKTAGCLKLLMCKGQPIIWG
MQESLKKRLAGEPEEPDDNDSYFNKKILFKHLPSLEDFRNHSASCEVKYH
EECPKNATTGSYFASFLDH
BO29946.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:14:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32040-PA | 313 | CG32040-PA | 1..313 | 1..313 | 1631 | 100 | Plus |