BO29952.complete Sequence
1111 bp assembled on 2012-04-24
GenBank Submission: KX796966
> BO29952.complete
GAAGTTATCAGTCGACATGTGGTTGGCTGGGAATCTGTTCAAAGGATCCG
TAGCAATCAGATTCGGTCGCTTGCTGCATCTCAAGCGCAAGGAGGTTTAT
ATGGAATGCTTCCGCATCCTGGGCGTTCACGAATCAGCTGATCAGAATAC
GGTACGCCACGCCTACTTGGATCTGGTGAAACGGGTGCATCCCGATTCGG
GAACGGAGGAGGCCAGTGCCGAACGCTTCCAGCAGGTGGACGAGGCTTTC
CGTGTGCTGCAGGAAAAGTTCGCCAAGGGAAGGCGAAACATTCAGGAGGA
CGAGGAGGGGGCCATGGAGTTTGACATCAAGCATACGGCGCCGCAGCACC
GGCAATATCTGTCCAACGAGGGCATCGGAGTGGGAACTCCATTTCAGCGG
CAAAAGCAGTACCAGCAGGTGCGCGCCATGAAGGCTCAGGAACGCGTCCT
GGAGCACCGCATCGACAAGGCGGCTGCCGGAGAGAAAACACTAATGTCCA
AGGGCGGCAGCCACTTTCGGAAACATGCTATTAAGACCAAGTACGGTATT
GATCGTGTGGTCGAGGATCTCATTCAGGAGGCCATGTCCAAGGGTGACTT
TAACAATCTAAACGGGTCTGGAAAGCCCCTGTCCTCGGCTCAGTCGCAGA
ATCCCTATCTGGACTTTACGACCCACAAGTTGAACAAGATTATGTTAGAC
AACGGCTTCACGCCGGAATGGATAAGCCTGGGCAAGGATATTCGCGATGC
GATTGCTCAGCTGAAGACGAAACTGCGCCAGGAGCGCAAATACTACGGCG
AATGGCCATTGCAGCGCCCGGACGATCTGGCAGCCTGGAAAATATTCACG
CTGAATCACCAGGACGATGTGAAGCAATTGAACAAACTCATTGACAAGTA
CAATCTAATAGTGCCCATTCTGGAAAATCAGTTCTTTCGCCTGCATCTCG
ACAGAATGGCCGAACCTATATTTAAGGATCCGGAATTGCAACGTAACGTA
ATCAGACCCGAAATGAAATCTAAGCCCAGCAGCAATCTAGAGAATCAGGG
CAGCGCTAGTACAAGTTTATTTTCCCTAATTAGCAAACTATTGGCAAGCT
TTCTAGACCAT
BO29952.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:49:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43322-RA | 1080 | CG43322-PA | 1..1077 | 17..1093 | 5385 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:49:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43322-RA | 1272 | CG43322-RA | 101..1177 | 17..1093 | 5385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:49:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 7013652..7014642 | 103..1093 | 4955 | 100 | Plus |
2L | 23513712 | 2L | 7013496..7013583 | 17..104 | 440 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:49:07 has no hits.
BO29952.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:00:52 Download gff for
BO29952.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13776-RA | 101..1177 | 17..1095 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:52 Download gff for
BO29952.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43322-RA | 101..1177 | 17..1095 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:58:05 Download gff for
BO29952.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43322-RA | 101..1177 | 17..1095 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:58:05 Download gff for
BO29952.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 7013496..7013582 | 17..103 | 100 | -> | Plus |
2L | 7013653..7014642 | 104..1095 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:52 Download gff for
BO29952.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 7013496..7013582 | 17..103 | 100 | -> | Plus |
arm_2L | 7013653..7014642 | 104..1095 | 99 | | Plus |
BO29952.pep Sequence
Translation from 16 to 1111
> BO29952.pep
MWLAGNLFKGSVAIRFGRLLHLKRKEVYMECFRILGVHESADQNTVRHAY
LDLVKRVHPDSGTEEASAERFQQVDEAFRVLQEKFAKGRRNIQEDEEGAM
EFDIKHTAPQHRQYLSNEGIGVGTPFQRQKQYQQVRAMKAQERVLEHRID
KAAAGEKTLMSKGGSHFRKHAIKTKYGIDRVVEDLIQEAMSKGDFNNLNG
SGKPLSSAQSQNPYLDFTTHKLNKIMLDNGFTPEWISLGKDIRDAIAQLK
TKLRQERKYYGEWPLQRPDDLAAWKIFTLNHQDDVKQLNKLIDKYNLIVP
ILENQFFRLHLDRMAEPIFKDPELQRNVIRPEMKSKPSSNLENQGSASTS
LFSLISKLLASFLDH
BO29952.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:13:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43322-PA | 359 | CG43322-PA | 1..359 | 1..359 | 1862 | 100 | Plus |