BO29961.complete Sequence
559 bp assembled on 2011-09-15
GenBank Submission: KX793883
> BO29961.complete
GAAGTTATCAGTCGACATGGAACCTGCTAAAGTGATTGGAAAGCTAAAGG
AGCAAGTGCGCATGGAGCACAATTCGCGTCGTAGTTTTCCAAAAGCTTGG
AGCGAAATTTCGGGCAAGCAAACTAACAAGTTCTACCACCAATCTGAGAT
TAATTCTCAACTAAGTAACCAGCTAAAATTAAAAGACCTGTGCCCTTTTG
TGCACAACAACCAAGGCGAATCGCGATTCGTATCTCCGGAGATGTACAAA
CCTTTACTGGCCGTCTGTCGCTGTGGGCGAACTAAGGAAAGCATCCATAT
GGGAAAATGCTTACAAAGAGCCTTGAGTCCAGATTACAAGCAAGAAATGG
TACAGAATGGCACTGATGCATGGAGTGCAGAACCATTTAATGTGCCTTCC
ACTTCAAGCTCTACCATTGGCTTCGCAGCTATTTCGAAAAACTACCAAAA
GCTGGAGCGTTCTATGCAATATGTTTCTCCTGCGTTTTCCATGCCTGGCC
CTCGAATTACAGCAGTCCCTTACTATAATATTATTATTGGAGCAAGCTTT
CTAGACCAT
BO29961.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:41:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34453-RB | 528 | CG34453-PB | 1..525 | 17..541 | 2625 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:41:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34453-RB | 705 | CG34453-RB | 1..525 | 17..541 | 2625 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:41:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 232848..233074 | 410..184 | 1135 | 100 | Minus |
| 3L | 28110227 | 3L | 233125..233264 | 185..46 | 700 | 100 | Minus |
| 3L | 28110227 | 3L | 232660..232790 | 541..411 | 655 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:41:43 has no hits.
BO29961.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-15 17:23:16 Download gff for
BO29961.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34453-RB | 1..525 | 17..543 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:20:38 Download gff for
BO29961.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34453-RB | 1..525 | 17..543 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:15:22 Download gff for
BO29961.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34453-RB | 1..525 | 17..543 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:15:22 Download gff for
BO29961.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 232658..232790 | 411..543 | 98 | <- | Minus |
| 3L | 232848..233072 | 186..410 | 100 | <- | Minus |
| 3L | 233125..233264 | 46..185 | 100 | <- | Minus |
| 3L | 233323..233351 | 17..45 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:20:38 Download gff for
BO29961.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 232658..232790 | 411..543 | 98 | <- | Minus |
| arm_3L | 232848..233072 | 186..410 | 100 | <- | Minus |
| arm_3L | 233125..233264 | 46..185 | 100 | <- | Minus |
| arm_3L | 233323..233351 | 17..45 | 100 | | Minus |
BO29961.pep Sequence
Translation from 16 to 559
> BO29961.pep
MEPAKVIGKLKEQVRMEHNSRRSFPKAWSEISGKQTNKFYHQSEINSQLS
NQLKLKDLCPFVHNNQGESRFVSPEMYKPLLAVCRCGRTKESIHMGKCLQ
RALSPDYKQEMVQNGTDAWSAEPFNVPSTSSSTIGFAAISKNYQKLERSM
QYVSPAFSMPGPRITAVPYYNIIIGASFLDH
BO29961.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:19:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34453-PB | 175 | CG34453-PB | 1..175 | 1..175 | 923 | 100 | Plus |
