BO29962.complete Sequence
490 bp assembled on 2012-04-24
GenBank Submission: KX796080
> BO29962.complete
GAAGTTATCAGTCGACATGGAACAGGCGTACAGTACAGCTTCCCGACTGC
GTGGGATTTGCGTTTGTGGATTGGCCATTTCGGTGTATTCACTGTATGTG
AAAATGAAACTAAAGGAGGATGAGAACTATAGGCCAATGTGCGACGTTAA
CGATAATATAAGCTGCTCGCTGGTTTTTAAATCGGGCTATGGTGATGGCT
TTGGTCTGGGTAACATAACCCAAGTAAATGCTCCCAACGGAGCCATCGGC
TGTGCATTTTATATCCTGTACTTCTTGAGCTCTTTCTTTAATCATCGTTG
GCTGTGCCTGGTCCAATTGATAGTATGCACTTTGACATTACTTCTCTGCG
TTTATCTGGGTTTCCTGCTGATTCTCGTGTTTTACGATTTCTGTTTGGTA
TGCGTGACCATCTATTTCATACACACATGGCTCTTTCAGGAAGTCCTAAG
GCGATATAGACGCCTTTATATGGCAAGCTTTCTAGACCAT
BO29962.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:49:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vkor-RA | 459 | CG33544-PA | 1..456 | 17..472 | 2280 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:49:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vkor-RA | 520 | CG33544-RA | 1..456 | 17..472 | 2280 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:49:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16778740..16778930 | 282..472 | 955 | 100 | Plus |
| 2R | 25286936 | 2R | 16778365..16778534 | 17..186 | 850 | 100 | Plus |
| 2R | 25286936 | 2R | 16778589..16778684 | 186..281 | 480 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:49:40 has no hits.
BO29962.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:00:55 Download gff for
BO29962.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vkor-RA | 1..456 | 17..474 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:01 Download gff for
BO29962.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vkor-RA | 1..456 | 17..474 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:58:19 Download gff for
BO29962.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vkor-RA | 1..456 | 17..474 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:58:19 Download gff for
BO29962.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16778365..16778534 | 17..186 | 100 | -> | Plus |
| 2R | 16778590..16778684 | 187..281 | 100 | -> | Plus |
| 2R | 16778740..16778930 | 282..474 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:01 Download gff for
BO29962.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12665870..12666039 | 17..186 | 100 | -> | Plus |
| arm_2R | 12666095..12666189 | 187..281 | 100 | -> | Plus |
| arm_2R | 12666245..12666435 | 282..474 | 98 | | Plus |
BO29962.pep Sequence
Translation from 16 to 490
> BO29962.pep
MEQAYSTASRLRGICVCGLAISVYSLYVKMKLKEDENYRPMCDVNDNISC
SLVFKSGYGDGFGLGNITQVNAPNGAIGCAFYILYFLSSFFNHRWLCLVQ
LIVCTLTLLLCVYLGFLLILVFYDFCLVCVTIYFIHTWLFQEVLRRYRRL
YMASFLDH
BO29962.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:13:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vkor-PA | 152 | CG33544-PA | 1..152 | 1..152 | 818 | 100 | Plus |
