Clone BO29963 Report

Search the DGRC for BO29963

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:299
Well:63
Vector:pDNR-Dual
Associated Gene/TranscriptCG13905-RB
Protein status:BO29963.pep: Imported from assembly
Sequenced Size:748

Clone Sequence Records

BO29963.complete Sequence

748 bp assembled on 2011-09-15

GenBank Submission: KX794893

> BO29963.complete
GAAGTTATCAGTCGACATGCGGTTCATCGGTTGTGCTTTCTTGGGCTTCA
TGTGCCTGGTGGCTTTTCCCTCTGCAACGCCGGCTATTTTGGCTCCGATC
CGGCCATATGGTCAGAATGGAACCCTCGCTCAGCAGAACAACTTTGCCTT
GGAGCTGAAGTCGGTGATTCGACAGATACCGGTGGACAACATCGAGAAGC
TGGTTCAGACCTACCTCCTCAACGACATCGAGTTCCAAGGTGTGATCAGA
GCCATTAACTCCCTACCCGCCTATCGATTCTACCGCCAGTTGATCAACCA
ACCCGAAGTGCGCCAACTGCAGCAGTGGATCACGCAGCAATTGATCCTGT
CCGGCGGTGGACCCAAAATCTTTGATTATCTAGAACTGGAGATCAAGATC
TTGAACAAGTATCCCTATTGGTCGCAGATCGTAAATGGAATCCAGGGATT
CCAAGCGGAGTTCGTGCAGATCTACCCAGTGCAACTGATCCGATCCTTTC
TGGAACCCAGTGCCACCCAAACAAGTCCTCAACTGTCGGAACTCTGGCGT
CGTCTGGTGGCCTTGCGTCCAGTTTACGAAAGAGTTTTGGCCACTCCACC
CGGCAAGGCCATCACTGCTGAACTCCAGAGACTGGGCGTGGATGTGGGTG
GTGTAGACGCCCTTATCCGTTATCAGTTCGGTTGGAGCAACGTCACCTTT
CCGAGCTACGATTACACAGATTACCTGTACGCAAGCTTTCTAGACCAT

BO29963.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:42:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG13905-RB 717 CG13905-PB 1..714 17..730 3570 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:42:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG13905-RB 913 CG13905-RB 1..714 17..730 3570 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:42:02
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 902898..903611 17..730 3570 100 Plus
Blast to na_te.dros performed on 2014-11-27 07:42:03 has no hits.

BO29963.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-15 17:23:16 Download gff for BO29963.complete
Subject Subject Range Query Range Percent Splice Strand
CG13905-RB 1..714 17..732 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:20:45 Download gff for BO29963.complete
Subject Subject Range Query Range Percent Splice Strand
CG13905-RB 1..714 17..732 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:15:27 Download gff for BO29963.complete
Subject Subject Range Query Range Percent Splice Strand
CG13905-RB 1..714 17..732 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:15:27 Download gff for BO29963.complete
Subject Subject Range Query Range Percent Splice Strand
3L 902898..903611 17..732 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:20:45 Download gff for BO29963.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 902898..903611 17..732 99   Plus

BO29963.pep Sequence

Translation from 16 to 748

> BO29963.pep
MRFIGCAFLGFMCLVAFPSATPAILAPIRPYGQNGTLAQQNNFALELKSV
IRQIPVDNIEKLVQTYLLNDIEFQGVIRAINSLPAYRFYRQLINQPEVRQ
LQQWITQQLILSGGGPKIFDYLELEIKILNKYPYWSQIVNGIQGFQAEFV
QIYPVQLIRSFLEPSATQTSPQLSELWRRLVALRPVYERVLATPPGKAIT
AELQRLGVDVGGVDALIRYQFGWSNVTFPSYDYTDYLYASFLDH

BO29963.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:19:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG13905-PB 238 CG13905-PB 1..238 1..238 1235 100 Plus
CG14963-PA 261 CG14963-PA 29..228 21..226 310 35.9 Plus