BO29969.complete Sequence
625 bp assembled on 2011-09-15
GenBank Submission: KX800021
> BO29969.complete
GAAGTTATCAGTCGACATGAGCCAATACGACAATCCGTTTAAGATTATCA
TCCTGGGTGACAGCGGCGTAGGCAAAACCTGCCTGCTGATGCGTTTCTCG
GATAACCAATTCACCACAAGACACCGGAGCACTGTGGGCTTGGATAGAAG
GGAGTGCAGCGTGGAGTTTGCCGATTGGAGGATGGGGAGGATGCTGCAAG
TCTGGGACACCTCCGACGACGAGCGCTTCAAATTGCTGAAGGCGACCCAA
TGTCGCAGTGCCCATGGCATACTGCTCGTCTACGACATAACGTCGTCCAA
AAGTTTCCAAAACATCGATGGCTGGATGAAGGAGATACGGCGCCTGTGTC
CGGATAAGGTAACCGTCCTGCTGGTGGGCAACAAAAGTGATGATCCGAAC
CATCGCCAGGTGAGCATGGCGCAGGGGTTCAACTATGCCCATCGTCAGTC
AATCTGCTTTGAAGAGGTTTCCGCCAAAAGTGGAAGGAATGTATATGACA
TATTTAGCTCGTTGGCAATGGACATATATACATATCGTCGTGTACATTGC
AACCCGTTCAGCTTGACATCTTGGCAGGAAGAGGAGGACGCTGCAGAGTC
ACTGGATGCAAGCTTTCTAGACCAT
BO29969.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:37:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rab9Fa-RA | 594 | CG32671-PA | 1..591 | 17..607 | 2955 | 100 | Plus |
Rab9D-RA | 594 | CG32678-PA | 1..591 | 17..607 | 2880 | 99.2 | Plus |
Rab9E-RA | 594 | CG32673-PA | 1..591 | 17..607 | 2865 | 99 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:37:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rab9Fa-RA | 871 | CG32671-RA | 68..658 | 17..607 | 2955 | 100 | Plus |
Rab9D-RA | 897 | CG32678-RA | 94..684 | 17..607 | 2880 | 99.2 | Plus |
Rab9E-RA | 889 | CG32673-RA | 86..676 | 17..607 | 2865 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:37:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 10950373..10950963 | 607..17 | 2955 | 100 | Minus |
X | 23542271 | X | 10589182..10589772 | 17..607 | 2880 | 99.2 | Plus |
X | 23542271 | X | 10661168..10661758 | 607..17 | 2865 | 99 | Minus |
X | 23542271 | X | 10622568..10623158 | 607..17 | 2820 | 98.5 | Minus |
X | 23542271 | X | 10417496..10418080 | 17..607 | 1620 | 86 | Plus |
X | 23542271 | X | 10951938..10952419 | 504..17 | 1070 | 81.8 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:37:50 has no hits.
BO29969.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-15 17:23:08 Download gff for
BO29969.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rab9Fa-RA | 68..658 | 17..609 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:19:20 Download gff for
BO29969.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rab9Fa-RA | 68..658 | 17..609 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:14:15 Download gff for
BO29969.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rab9Fa-RA | 68..658 | 17..609 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:14:15 Download gff for
BO29969.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 10950371..10950963 | 17..609 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:19:20 Download gff for
BO29969.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 10844404..10844996 | 17..609 | 99 | | Minus |
BO29969.pep Sequence
Translation from 16 to 625
> BO29969.pep
MSQYDNPFKIIILGDSGVGKTCLLMRFSDNQFTTRHRSTVGLDRRECSVE
FADWRMGRMLQVWDTSDDERFKLLKATQCRSAHGILLVYDITSSKSFQNI
DGWMKEIRRLCPDKVTVLLVGNKSDDPNHRQVSMAQGFNYAHRQSICFEE
VSAKSGRNVYDIFSSLAMDIYTYRRVHCNPFSLTSWQEEEDAAESLDASF
LDH
BO29969.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:19:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rab9Fa-PA | 197 | CG32671-PA | 1..197 | 1..197 | 1047 | 100 | Plus |
Rab9D-PA | 197 | CG32678-PA | 1..197 | 1..197 | 1028 | 98.5 | Plus |
Rab9E-PA | 197 | CG32673-PA | 1..197 | 1..197 | 1020 | 97.5 | Plus |
Rab9Db-PA | 197 | CG9807-PA | 1..197 | 1..197 | 1017 | 97.5 | Plus |
RabX2-PA | 195 | CG2885-PA | 1..195 | 1..197 | 691 | 72.2 | Plus |