BO29970.complete Sequence
715 bp assembled on 2011-09-15
GenBank Submission: KX799433
> BO29970.complete
GAAGTTATCAGTCGACATGTCATTTAAACTATCTTTGCATTGTCTGCTGA
TCCTGGCAGGATATCTCACTTCAATTGAAGCCGAAGTTTTCCCGCAGTGC
GCAAATGCTCCATTGGATACCTTTGTCATGGCCATCGAAGATTGCGCTTC
ATACATCTATTGCAATGGAGAAGACTCCTTCCGAGACAGCTGCCCCGAGT
CCACCTACTTTGACGATCGAACCCAAGAGTGTGCCTTTGATGATGAGGGT
GTGTGTCTAAGGAACTCAGACTCAGTCCAGACTGAGGAGCAGCCCGATAA
GCAAACTACTGGTGAGGAGCAGAGCGGGATCGAAGAAACCACTCCCGTTC
CAACACCGCCTTCTGATTACGCCTCTACAGGATCTGCGGACTCTTCTACT
TTCCAAGCTGATTCTACAACAACCCCTACAGAATCAATTCCTTCAGTGAC
TGAGCCACCGACTACATCTGCTACGCCATCCTCCCCATCTGCAAAGCCTT
CCTCTCCAGCTCAGGAAAGGCCGCACTGCGACATTTCCGGAGATGGTGAC
CATCCTCATCCCCAGCGGTGCGAGTACTACTACAGGTGCCTCAGCGGCTA
TCTGACCATTGTGAGATGTCCTTACAAGTATGGCTGGGACTTTCCTACAA
AGCAATGCAAGCCTAGCAGCGAGGCTCAGTGCTTTAGTTATAGCTACGCA
AGCTTTCTAGACCAT
BO29970.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:38:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33263-RA | 684 | CG33263-PA | 1..681 | 17..697 | 3405 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:38:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33263-RA | 849 | CG33263-RA | 1..681 | 17..697 | 3405 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:38:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13423488..13424169 | 697..16 | 3410 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:38:10 has no hits.
BO29970.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-15 17:23:09 Download gff for
BO29970.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33263-RA | 1..681 | 17..699 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:19:26 Download gff for
BO29970.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33263-RA | 1..681 | 17..699 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:14:21 Download gff for
BO29970.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33263-RA | 1..681 | 17..699 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:14:21 Download gff for
BO29970.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13423486..13424168 | 17..699 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:19:26 Download gff for
BO29970.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13416586..13417268 | 17..699 | 99 | | Minus |
BO29970.pep Sequence
Translation from 16 to 715
> BO29970.pep
MSFKLSLHCLLILAGYLTSIEAEVFPQCANAPLDTFVMAIEDCASYIYCN
GEDSFRDSCPESTYFDDRTQECAFDDEGVCLRNSDSVQTEEQPDKQTTGE
EQSGIEETTPVPTPPSDYASTGSADSSTFQADSTTTPTESIPSVTEPPTT
SATPSSPSAKPSSPAQERPHCDISGDGDHPHPQRCEYYYRCLSGYLTIVR
CPYKYGWDFPTKQCKPSSEAQCFSYSYASFLDH
BO29970.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:19:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33263-PA | 227 | CG33263-PA | 1..227 | 1..227 | 1245 | 100 | Plus |
| obst-H-PA | 269 | CG33983-PA | 3..251 | 4..226 | 238 | 24.3 | Plus |
| CG33985-PA | 277 | CG33985-PA | 5..268 | 5..224 | 232 | 24.9 | Plus |
| CG7252-PA | 474 | CG7252-PA | 9..207 | 7..202 | 176 | 28.6 | Plus |
| CG42729-PA | 185 | CG42729-PA | 11..172 | 12..214 | 159 | 23.7 | Plus |
