Clone BO29981 Report

Search the DGRC for BO29981

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:299
Well:81
Vector:pDNR-Dual
Associated Gene/Transcriptmst-RA
Protein status:BO29981.pep: Imported from assembly
Sequenced Size:1756

Clone Sequence Records

BO29981.complete Sequence

1756 bp assembled on 2012-04-24

GenBank Submission: KX798917

> BO29981.complete
GAAGTTATCAGTCGACATGGACTATACACGTGAAATTTTGACCTTCCAGT
TCGGAACGTACGCGAATTACGTGGGCACACACTTCTGGAACCAGCAGGAG
GCCAACTTTAGGTACGGAGACGAAAGCGAACAGGTGGCCGAGGAGCAGCT
GCCCAACAATGATATTTTGTACCGTGAAGGGCGCAACGACCTCAATCGTA
CCACCTACACGCCCCGCCTGCTGTCCGTGGATTTGTCCGGGACCCTGGGA
CATCTGCCGGTGACCGGCGAGCTGTACGGCAATTTTGTGCAGCGTGATGA
GGAGTTGCTGCCCCTGAGCACCGGAGAGGAATTGGAACAGGTTCGCAAGC
GGGCAGAGGAGAGCGGCGTATGCTCACCGGAGCAGCTGGAAGTGCAGGAG
CAGTCGAAGGCCTCCATTTCCGAATATCAGCGGGATCTGCTCAAGAATGC
TGTGGTGCCCGAGAAGAACTATCAGCTGGCAGCGACGGCAAACAGTTGGG
TGGACTTCCTTTACGCCAGGTATCACCCGAGAACCTTGAATGTCTTGCCG
GGGCTGATCCGAGATCCGACTGCCCAAGCCCTGGGTACCTACTCTGCCGG
AACAGAAATGTGGCAGGAAGTCTCCTTCAACGAGGAGTTCTGCGATCGTA
TCCGTTTGTATGTAGAGGAGTGCGATGGCCTGCAGGGCTTCCACGTGCTG
TTCGACATTGACGATGGCTTCGGCGGACTGGCTGGGAAGTGCCTGGAGCA
CCTCAACGATGAGTACAGCCGGGCGAGTTTCGCGCTGCCACTTCACTATC
CCAGGATCACTAGTTATCCCCAAGCGGATACCCGCCTGTCGCACAGCATT
CGGGTGGTAAACAATGTGTTGGGCTACCACCAACTCAGCGAGCAGGCTTT
GATGTTCACGCCGCTATCCACGCTGGAGACCATCTGGCGAAACAATAATC
TGAAGTCGCGCAGTCTGCCGGGACTCCAGTGGGAGACGGATAACCTCTAC
CAGACATCAGCGCTGCTGGCCGCCTTTTTCGACACGGCCACCTTGAGTTA
CCGCCTGCGGCAAACGCCAGAATCTTTGCTACGCTTTTGCGAATGCGTCA
CTCCAGCGGGCAGAAAGATGACCGCCGCTGGATTGGCTCTGCCATTTGGG
CTGAGGGAGGGTCAGGATCTGATAGAGTTTCTAGACCAGAGTGGCGACCA
CGCGCTGCTCACACAACTCACACCGGGCTGTGAGCCTGGCACATCCTACG
TGGTGCAATCAGTGACGGCTCGTGGCATTCCCGCGGAACGTTTGAAACGG
CCCAGGGAGCTGGCCGGCGATCAACTTCGGATGGCTGCCTATAGCTGCGA
TAGTATATCCCATATGCTGCAGCTATACTACCAGTGCACCTATCATGGAA
GTGTTACAAATGCGGCAGCCACACCACTGCCACTAAAGACACAGCTACCT
TTTCCTTATGAAATGTTTGCAGCCGGTATATCACGCGATGGCTACCGCTT
GCCTGAGGGGGCGGAACGCGAGACGGGTAGTCGTGTGGATTCGGCACCCA
TGCTGGCCGCCGTACAGAACTCCACCAAGCTGGGCGAGCATCTGGACAAT
GTGCACGCCCAATCGCATCGAGTGCAGCTGGCCAAGTTGCAAGCGTACTC
TAATTCTGGATTGGAGCGGGATGAGTACGATACGGCGCTGGATCAGCTGC
TTGAGTTCCGCGACCTTTACGCAGACTCGCAGTATCTAGCAAGCTTTCTA
GACCAT

BO29981.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:43:58
Subject Length Description Subject Range Query Range Score Percent Strand
mst-RB 1725 CG1424-PB 1..1722 17..1738 8610 100 Plus
mst-RA 1725 CG1424-PA 1..1722 17..1738 8610 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:43:59
Subject Length Description Subject Range Query Range Score Percent Strand
mst-RB 2443 CG1424-RB 36..1757 17..1738 8610 100 Plus
mst-RA 1893 CG1424-RA 36..1757 17..1738 8610 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:43:56
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 21389936..21390847 827..1738 4560 100 Plus
X 23542271 X 21389145..21389877 95..827 3665 100 Plus
X 23542271 X 21389012..21389093 17..98 410 100 Plus
Blast to na_te.dros performed on 2014-11-28 04:43:57 has no hits.

BO29981.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:00:29 Download gff for BO29981.complete
Subject Subject Range Query Range Percent Splice Strand
mst-RA 6..1727 17..1740 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:46 Download gff for BO29981.complete
Subject Subject Range Query Range Percent Splice Strand
mst-RA 36..1757 17..1740 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:56:00 Download gff for BO29981.complete
Subject Subject Range Query Range Percent Splice Strand
mst-RA 36..1757 17..1740 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:56:00 Download gff for BO29981.complete
Subject Subject Range Query Range Percent Splice Strand
X 21389012..21389092 17..97 100 -> Plus
X 21389148..21389877 98..827 100 -> Plus
X 21389937..21390847 828..1740 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:46 Download gff for BO29981.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 21260039..21260119 17..97 100 -> Plus
arm_X 21260175..21260904 98..827 100 -> Plus
arm_X 21260964..21261874 828..1740 99   Plus

BO29981.pep Sequence

Translation from 16 to 1756

> BO29981.pep
MDYTREILTFQFGTYANYVGTHFWNQQEANFRYGDESEQVAEEQLPNNDI
LYREGRNDLNRTTYTPRLLSVDLSGTLGHLPVTGELYGNFVQRDEELLPL
STGEELEQVRKRAEESGVCSPEQLEVQEQSKASISEYQRDLLKNAVVPEK
NYQLAATANSWVDFLYARYHPRTLNVLPGLIRDPTAQALGTYSAGTEMWQ
EVSFNEEFCDRIRLYVEECDGLQGFHVLFDIDDGFGGLAGKCLEHLNDEY
SRASFALPLHYPRITSYPQADTRLSHSIRVVNNVLGYHQLSEQALMFTPL
STLETIWRNNNLKSRSLPGLQWETDNLYQTSALLAAFFDTATLSYRLRQT
PESLLRFCECVTPAGRKMTAAGLALPFGLREGQDLIEFLDQSGDHALLTQ
LTPGCEPGTSYVVQSVTARGIPAERLKRPRELAGDQLRMAAYSCDSISHM
LQLYYQCTYHGSVTNAAATPLPLKTQLPFPYEMFAAGISRDGYRLPEGAE
RETGSRVDSAPMLAAVQNSTKLGEHLDNVHAQSHRVQLAKLQAYSNSGLE
RDEYDTALDQLLEFRDLYADSQYLASFLDH

BO29981.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:16:54
Subject Length Description Subject Range Query Range Score Percent Strand
mst-PB 574 CG1424-PB 1..574 1..574 3005 100 Plus
mst-PA 574 CG1424-PA 1..574 1..574 3005 100 Plus