Clone BO29985 Report

Search the DGRC for BO29985

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:299
Well:85
Vector:pDNR-Dual
Associated Gene/TranscriptCG11454-RA
Protein status:BO29985.pep: Imported from assembly
Sequenced Size:748

Clone Sequence Records

BO29985.complete Sequence

748 bp assembled on 2012-04-24

GenBank Submission: KX797493

> BO29985.complete
GAAGTTATCAGTCGACATGGACTTGCAGTTACTAATGCAGCAAATGTATA
GTGGTGCGTCGGTCATGACGATTTCGGAAACGAACATAGATGGTTACAGA
TACGGTATTCCATCTGGCCAGCACCAAGAGCAGCCAATTTACCCTTTCCT
GCCCAATGAAAACGGTGACCAGTTGGTTGGGCAACTGGAGGACGACGACG
ATGAGGAGGAGGACGAGGAGCAACGGACTCTGTTCTGCGGGAATCTCGAC
GAGCGCGTGACGGAGGAGATCCTTTACGAGGTGTTCCTGCAAGCTGGCCC
CATCGAAGGAGTGCGGATACCGACCGATAACAATGGGCGTCCCCGGAATT
TCGGGTTTGTCACATACCAACGCCTGTGTGCGGTGCCTTTTGCCCTAGAC
TTGTACCAGGGCCTTGAACTGTTCCAAAAGAAAGTCACCATCAAGCAGCA
GGGCGGCAAGCAGCTACCTGCCTACAACCAAAGTCGTCTGCGCAATCAGT
TCATGATGGAGGCTCTACCGCAGCCATCGCCACTGCGTCACGCCCGACAC
AGTTTGCATAACGGCAAGCCGTACGATCGCAATCCTTTTGGACACAACGC
CGATCAACGGCGCCGGAGCGACAGCTCCGTAATGGAACGCAACCGGCTAA
AACCACAGCAACACCACCAGCACATGCAGGGAGGCAGCAGAAGATCGGAC
CAACGCTCCAACAACAAACGCAGATTGCTTGCAAGCTTTCTAGACCAT

BO29985.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:50:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG11454-RA 717 CG11454-PA 1..714 17..730 3570 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:50:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG11454-RA 905 CG11454-RA 56..769 17..730 3570 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:50:02
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 143378..144091 17..730 3570 100 Plus
Blast to na_te.dros performed on 2014-11-28 04:50:03 has no hits.

BO29985.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:00:56 Download gff for BO29985.complete
Subject Subject Range Query Range Percent Splice Strand
CG11454-RA 70..783 17..732 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:06 Download gff for BO29985.complete
Subject Subject Range Query Range Percent Splice Strand
CG11454-RA 56..769 17..732 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:58:33 Download gff for BO29985.complete
Subject Subject Range Query Range Percent Splice Strand
CG11454-RA 56..769 17..732 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:58:33 Download gff for BO29985.complete
Subject Subject Range Query Range Percent Splice Strand
2L 143378..144091 17..732 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:06 Download gff for BO29985.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 143378..144091 17..732 99   Plus

BO29985.pep Sequence

Translation from 16 to 748

> BO29985.pep
MDLQLLMQQMYSGASVMTISETNIDGYRYGIPSGQHQEQPIYPFLPNENG
DQLVGQLEDDDDEEEDEEQRTLFCGNLDERVTEEILYEVFLQAGPIEGVR
IPTDNNGRPRNFGFVTYQRLCAVPFALDLYQGLELFQKKVTIKQQGGKQL
PAYNQSRLRNQFMMEALPQPSPLRHARHSLHNGKPYDRNPFGHNADQRRR
SDSSVMERNRLKPQQHHQHMQGGSRRSDQRSNNKRRLLASFLDH

BO29985.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:14:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG11454-PA 238 CG11454-PA 1..238 1..238 1266 100 Plus