Clone BO29992 Report

Search the DGRC for BO29992

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:299
Well:92
Vector:pDNR-Dual
Protein status:BO29992.pep: Imported from assembly
Sequenced Size:970

Clone Sequence Records

BO29992.complete Sequence

970 bp assembled on 2011-09-20

> BO29992.complete
GAAGTTATCAGTCGACATGCTGAACATCGTGTGTAGAGTCTGCGGAAGGC
AGAAAATCTGTGAGAAGAGCCTGAATCTCTTCGATTTGGTCAACCGAAAA
TATCTAAAGCACTTGCACATGATAAGCGGACTAAGATTGGTGGATTTGGA
CGATGTTCCTGGTTTCATGTGCCTTTGCTGTCAGGCGGAACTCAGATCGG
CATTGGCATTCCGGAAGCTTTGCATTAAGACCCAAACTAAATGGCTAACC
ATCGAGGACGACTCTTCGTCGGGTGATGAAGATACCAATGACAATTCGGA
ACTGGAATCGGAAAAATGCGCATTCAGCGATTTTGGGAAAAAGAAAGAAG
GCGAGTTGGTTGAAGAAACTTTTCAGGTACTGATTGAAGAGGAGCCCATG
GACAAAACTCTGAATAGAGATGCGAAAGCGCAGCTGAGGGAAGATGGAAT
AGATGAGAAGTGTGTACCTTCACAAAAGATTATCAAAGTATCAACCAAAC
TGGATGATCAGATTTACATATGCGAGCTGTGCGGGACTCATGCCACATCG
AAACCCACTTTCCAGCGCCACATGAGAAAACACAGAGGCGAACGACCATT
TGGCTGCAAGGATTGTGATGCCAGGTTTCTCTCTGCTGGCGAACTACGTG
CCCACCACCGGGTACATACTGGGGAGCAACCGTTTGCCTGTCGCTTCTGC
GAAAAGCGGTATGTCAGCTACATGGGCCGGCTGATCCACGAGCGGACTCA
CACCAACGATCGACCCTATGTGTGCGAAGAGTGTGGCAAGAAGTTCACCA
CTGCCTACGTCCTAAAGAACCACATGGTCATCCACACGGGCGAGAGGAAT
TTCCGATGCGATATTTGCGATCGCTCCTTCCAGAGAAAGGCGCACCTGGT
AACGCACACCAGATCCATGATGCACCTCCAAAATGTCAAGAAGCAGAAGT
CAGCAAGCTTTCTAGACCAT

BO29992.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:49:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG11762-RA 939 CG11762-PA 1..936 17..952 4680 100 Plus
CG8159-RB 1200 CG8159-PB 796..903 737..844 240 81.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:49:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG11762-RA 1141 CG11762-RA 1..941 12..952 4690 99.9 Plus
CG8159-RB 1328 CG8159-RB 870..977 737..844 240 81.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:49:43
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8725652..8726125 137..610 2370 100 Plus
3R 32079331 3R 8726188..8726530 610..952 1715 100 Plus
3R 32079331 3R 8725479..8725603 12..136 610 99.2 Plus
3R 32079331 3R 8727853..8727960 737..844 240 81.5 Plus
Blast to na_te.dros performed on 2014-11-27 10:49:44 has no hits.

BO29992.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:55:31 Download gff for BO29992.complete
Subject Subject Range Query Range Percent Splice Strand
CG11762-RA 6..941 17..954 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:21:39 Download gff for BO29992.complete
Subject Subject Range Query Range Percent Splice Strand
CG11762-RA 6..941 17..954 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:31:52 Download gff for BO29992.complete
Subject Subject Range Query Range Percent Splice Strand
CG11762-RA 6..941 17..954 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:31:52 Download gff for BO29992.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8725484..8725603 17..136 100 -> Plus
3R 8725652..8726124 137..609 100 -> Plus
3R 8726188..8726530 610..954 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:21:39 Download gff for BO29992.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4551910..4552252 610..954 99   Plus
arm_3R 4551206..4551325 17..136 100 -> Plus
arm_3R 4551374..4551846 137..609 100 -> Plus

BO29992.pep Sequence

Translation from 16 to 970

> BO29992.pep
MLNIVCRVCGRQKICEKSLNLFDLVNRKYLKHLHMISGLRLVDLDDVPGF
MCLCCQAELRSALAFRKLCIKTQTKWLTIEDDSSSGDEDTNDNSELESEK
CAFSDFGKKKEGELVEETFQVLIEEEPMDKTLNRDAKAQLREDGIDEKCV
PSQKIIKVSTKLDDQIYICELCGTHATSKPTFQRHMRKHRGERPFGCKDC
DARFLSAGELRAHHRVHTGEQPFACRFCEKRYVSYMGRLIHERTHTNDRP
YVCEECGKKFTTAYVLKNHMVIHTGERNFRCDICDRSFQRKAHLVTHTRS
MMHLQNVKKQKSASFLDH

BO29992.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:10:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG11762-PA 312 CG11762-PA 1..312 1..312 1686 100 Plus
CG8159-PB 399 CG8159-PB 1..334 1..309 613 38.2 Plus
ranshi-PA 346 CG9793-PA 5..338 5..309 599 36.1 Plus
CG8145-PB 370 CG8145-PB 1..330 1..314 574 36.4 Plus
CG8145-PC 370 CG8145-PC 1..330 1..314 574 36.4 Plus