BO29993.complete Sequence
397 bp assembled on 2011-09-15
GenBank Submission: KX797906
> BO29993.complete
GAAGTTATCAGTCGACATGGCCAGCCTCAAGTGGTTAGCTATTCTACAAC
TCTTAATTATTTTCGGTGCTCTTGGGCACGCCGAAGTTGATGAAATTACC
GATGTCGTAAAGGAGAAGCTTTATGAGGCTATCTCCAAAACTGGATCTAC
GATCAAATCCGGATCGGCAAGCTTACAGAGTCTTGATGATGCCGTGCGTA
ACGTTATAAAAATGAAAAAGGGCGCGGCTAAGTCGCTCTTGGATCTAGTA
AGCAATCGTATCTTAAAACCTGAAAAGGACGCACCCGCTTCCCTCTCATC
ATGTGGTGAAGGGGAATTAGTTTGTGAAATCAAAGGGGTACTGGCCGCAG
AATCCACACAGCAACCAAACACCATAACTGCAAGCTTTCTAGACCAT
BO29993.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:43:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp26Ad-RB | 366 | CG42603-PB | 1..363 | 17..379 | 1815 | 100 | Plus |
Sfp26Ad-RA | 366 | CG42603-PA | 1..363 | 17..379 | 1815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:44:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp26Ad-RB | 612 | CG42603-RB | 51..413 | 17..379 | 1815 | 100 | Plus |
Sfp26Ad-RA | 435 | CG42603-RA | 31..393 | 17..379 | 1815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:43:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5942822..5943133 | 379..68 | 1560 | 100 | Minus |
2L | 23513712 | 2L | 5943203..5943254 | 68..17 | 260 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:43:58 has no hits.
BO29993.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-15 17:34:27 Download gff for
BO29993.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp26Ad-RA | 10..372 | 17..381 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:21:29 Download gff for
BO29993.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp26Ad-RA | 10..372 | 17..381 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:16:01 Download gff for
BO29993.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp26Ad-RA | 31..393 | 17..381 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:16:01 Download gff for
BO29993.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5942820..5943132 | 69..381 | 99 | <- | Minus |
2L | 5943203..5943254 | 17..68 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:21:29 Download gff for
BO29993.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5942820..5943132 | 69..381 | 99 | <- | Minus |
arm_2L | 5943203..5943254 | 17..68 | 100 | | Minus |
BO29993.pep Sequence
Translation from 16 to 397
> BO29993.pep
MASLKWLAILQLLIIFGALGHAEVDEITDVVKEKLYEAISKTGSTIKSGS
ASLQSLDDAVRNVIKMKKGAAKSLLDLVSNRILKPEKDAPASLSSCGEGE
LVCEIKGVLAAESTQQPNTITASFLDH
BO29993.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:19:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp26Ad-PB | 121 | CG42603-PB | 1..121 | 1..121 | 588 | 100 | Plus |
Sfp26Ad-PA | 121 | CG42603-PA | 1..121 | 1..121 | 588 | 100 | Plus |