Clone BO29994 Report

Search the DGRC for BO29994

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:299
Well:94
Vector:pDNR-Dual
Protein status:BO29994.pep: Imported from assembly
Sequenced Size:451

Clone Sequence Records

BO29994.complete Sequence

451 bp assembled on 2011-09-20

> BO29994.complete
GAAGTTATCAGTCGACATGATTCGAAAGTATTTAGTTCTTATCTTAGTCC
TGGGTTTCCTTCATCTCACCTGGAGTTCATCGGGGTCGTGCAAGGATGGT
TTGGTTTTTAACCCCAAAAAGCGGGTATGTGAACCGAAGCCAACGACAGA
ACCTCCAGATACTTGCCGACCCGGAACGTACTGGATTCTAGAGAAGAAAT
CGTGTATCAAGTTGCGGCAAGTAATGTCTGGATATTTTCCTGCAAAACCT
GAAAAGCCCATCCAAGACCTGAAGTGCCCCAAAGGATTAATTTCTTTGGG
AAATTTGTGTGTAAGGGAGTTAAAAATTAAAAAAAAATCTCAAGGGAGCG
GTAAAAACGGAATAGAGGTGGATATGGACGATAAATATAAAATTGTCATA
AAAGAAAAACAGACTGACCCTCCTCTTGATGCAGCAAGCTTTCTAGACCA
T

BO29994.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:48:45
Subject Length Description Subject Range Query Range Score Percent Strand
Sfp51E-RA 420 CG42476-PA 1..417 17..433 2085 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:48:46
Subject Length Description Subject Range Query Range Score Percent Strand
Sfp51E-RA 538 CG42476-RA 8..424 17..433 2085 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:48:43
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 15192742..15193004 433..171 1315 100 Minus
2R 25286936 2R 15193068..15193221 170..17 770 100 Minus
Blast to na_te.dros performed on 2014-11-27 10:48:44 has no hits.

BO29994.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:55:31 Download gff for BO29994.complete
Subject Subject Range Query Range Percent Splice Strand
Sfp51E-RA 8..424 17..435 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:21:27 Download gff for BO29994.complete
Subject Subject Range Query Range Percent Splice Strand
Sfp51E-RA 8..424 17..435 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:31:26 Download gff for BO29994.complete
Subject Subject Range Query Range Percent Splice Strand
Sfp51E-RA 8..424 17..435 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:31:26 Download gff for BO29994.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15192740..15193004 171..435 99 <- Minus
2R 15193068..15193221 17..170 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:21:27 Download gff for BO29994.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 11080245..11080509 171..435 99 <- Minus
arm_2R 11080573..11080726 17..170 100   Minus

BO29994.pep Sequence

Translation from 16 to 451

> BO29994.pep
MIRKYLVLILVLGFLHLTWSSSGSCKDGLVFNPKKRVCEPKPTTEPPDTC
RPGTYWILEKKSCIKLRQVMSGYFPAKPEKPIQDLKCPKGLISLGNLCVR
ELKIKKKSQGSGKNGIEVDMDDKYKIVIKEKQTDPPLDAASFLDH

BO29994.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:10:20
Subject Length Description Subject Range Query Range Score Percent Strand
Sfp51E-PA 139 CG42476-PA 1..139 1..139 746 100 Plus