Clone BO29995 Report

Search the DGRC for BO29995

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:299
Well:95
Vector:pDNR-Dual
Associated Gene/TranscriptCG15404-RA
Protein status:BO29995.pep: Imported from assembly
Sequenced Size:400

Clone Sequence Records

BO29995.complete Sequence

400 bp assembled on 2011-09-15

GenBank Submission: KX798099

> BO29995.complete
GAAGTTATCAGTCGACATGGTTGCCAAGATTCTGCTGAGCCTGCTGCTCC
TCGCTGTTGTCACCGATCTGGTCTCAGCCCAGTGCTCCCAAAACCTGTGC
CCAGTGGTCACGAACTCGAATCCCCGGTGCAAGGGAAAACTTCAGTATCA
ATGCGTTTGCGACTACACCTGCTCCGAGTGGGACAAGCCCTGCAACTGGG
TACTTACATGTCCTGAAGAAATCGACGACATCAATGAAGTGCGCGACAAG
AGAAATAAGCTAAATTTGTTCAGATTGCCCAATCGAAACCGCCTGGAGTG
CCTGGACATCAATGTCTACACCATTACGCGTCCGAATTGCTGCGACTTGT
TCTGCAAGTCTAAGCTTAAAGATGTCTGTTTCGCAAGCTTTCTAGACCAT

BO29995.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:42:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG15404-RB 369 CG15404-PB 1..366 17..382 1830 100 Plus
CG15404-RA 369 CG15404-PA 1..366 17..382 1830 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:43:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG15404-RB 468 CG15404-RB 16..386 12..382 1840 99.7 Plus
CG15404-RA 406 CG15404-RA 16..386 12..382 1840 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:42:56
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3173987..3174238 12..263 1245 99.6 Plus
2L 23513712 2L 3174304..3174422 264..382 595 100 Plus
Blast to na_te.dros performed on 2014-11-27 07:42:57 has no hits.

BO29995.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-15 17:34:25 Download gff for BO29995.complete
Subject Subject Range Query Range Percent Splice Strand
CG15404-RA 4..369 17..384 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:21:07 Download gff for BO29995.complete
Subject Subject Range Query Range Percent Splice Strand
CG15404-RA 4..369 17..384 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:15:42 Download gff for BO29995.complete
Subject Subject Range Query Range Percent Splice Strand
CG15404-RA 21..386 17..384 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:15:42 Download gff for BO29995.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3173992..3174238 17..263 100 -> Plus
2L 3174304..3174422 264..384 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:21:07 Download gff for BO29995.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3173992..3174238 17..263 100 -> Plus
arm_2L 3174304..3174422 264..384 98   Plus

BO29995.pep Sequence

Translation from 16 to 400

> BO29995.pep
MVAKILLSLLLLAVVTDLVSAQCSQNLCPVVTNSNPRCKGKLQYQCVCDY
TCSEWDKPCNWVLTCPEEIDDINEVRDKRNKLNLFRLPNRNRLECLDINV
YTITRPNCCDLFCKSKLKDVCFASFLDH

BO29995.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:19:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG15404-PB 122 CG15404-PB 1..122 1..122 674 100 Plus
CG15404-PA 122 CG15404-PA 1..122 1..122 674 100 Plus