BO30002.complete Sequence
958 bp assembled on 2012-04-24
GenBank Submission: KX798535
> BO30002.complete
GAAGTTATCAGTCGACATGTTAAGGCGCAGTCTAAGCCATCTGGACAAGC
TGCCGAAGGCAAAGGTGGCCGAATGGCTGGCCGGGATCGACACCATTATT
TGCAGCACGGATGGGGTGCTGTGGCAGGAGAATACCCCCATTGAGGGCTC
TGTAGAGGCATTCAATGCCATAATTTCAAAGGGAAAGCGATGTCTCATAG
CCACCAACGAGTGCTGCCTAACAAACAAGGATCTGTTCCAGAAGGCCAAG
TGCCTGGGCTTCAATGTCAAGGAGCAGGACATTTTCAGCTCGTCGGGTGC
CATTGCGAGTTACCTTAGCGACCGGAAGTTTAAGAAGAAAATCCTCGTTT
TGGGTGGTGACGGTATCCGCAAAGATCTGAAAGAGGCCGGATTCTGTTCC
GTGGTAAACGATCTGCAGCCAAATGACCAGAAAAAAATCGACTTCGTCAG
GAGCTTAGTTCTCGATCCGGATGTGGGAGCTGTTTTGGTGGCCAGAGACG
ACAACATGATAGCGAACGAGTTGCTTGTGGCCTGCAACTATCTTCAAAAT
CCCAAAGTCTTGTTCCTTACCACTTGCATTGATGGATTCCAGCCATTTGG
GAAAAAGAGGATCCCAGATGCCGGATCTCTGGCCTCTGCCATCGAGATAA
TTGTACAACGCAAGCCTATCGTTTTGGGCAAACCGAATCAGCGGATTTTG
GGCAAGTTGATGAAGTCTGGCGAAATAAAGCCCGAAAAGACGCTTGTCAT
TGGAAACTCGCTTAAATCAGACATTTTATTTGCAAGTATATGTGGTTTCC
AATCATTATTGGTGGGCTGCGATAACGGAGCGATCGAAAAAGCCGAGAAA
ATTAAAAAAGAGGGAGATGAGAAGAAAATGAAACTTGTTCCAGATGCTTT
TCTCTCCGGTCTTGCTTCTTTTGGGGAGTATTTATGCATCGCAAGCTTTC
TAGACCAT
BO30002.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:51:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11291-RA | 927 | CG11291-PA | 1..924 | 17..940 | 4620 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:51:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11291-RA | 1280 | CG11291-RA | 71..994 | 17..940 | 4620 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:51:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22211441..22212184 | 17..760 | 3720 | 100 | Plus |
| 2R | 25286936 | 2R | 22212238..22212418 | 760..940 | 905 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 04:51:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Paris | 1730 | Dvir\Paris TV1 1730bp Derived from Z49253. | 718..779 | 939..879 | 118 | 67.7 | Minus |
BO30002.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:01:02 Download gff for
BO30002.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11291-RA | 6..924 | 22..942 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:27 Download gff for
BO30002.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11291-RA | 76..994 | 22..942 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:59:15 Download gff for
BO30002.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11291-RA | 76..994 | 22..942 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:59:15 Download gff for
BO30002.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22211446..22212183 | 22..759 | 100 | -> | Plus |
| 2R | 22212238..22212418 | 760..942 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:27 Download gff for
BO30002.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18098951..18099688 | 22..759 | 100 | -> | Plus |
| arm_2R | 18099743..18099923 | 760..942 | 98 | | Plus |
BO30002.pep Sequence
Translation from 16 to 958
> BO30002.pep
MLRRSLSHLDKLPKAKVAEWLAGIDTIICSTDGVLWQENTPIEGSVEAFN
AIISKGKRCLIATNECCLTNKDLFQKAKCLGFNVKEQDIFSSSGAIASYL
SDRKFKKKILVLGGDGIRKDLKEAGFCSVVNDLQPNDQKKIDFVRSLVLD
PDVGAVLVARDDNMIANELLVACNYLQNPKVLFLTTCIDGFQPFGKKRIP
DAGSLASAIEIIVQRKPIVLGKPNQRILGKLMKSGEIKPEKTLVIGNSLK
SDILFASICGFQSLLVGCDNGAIEKAEKIKKEGDEKKMKLVPDAFLSGLA
SFGEYLCIASFLDH
BO30002.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:14:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11291-PA | 308 | CG11291-PA | 1..308 | 1..308 | 1575 | 100 | Plus |
| CG32488-PB | 307 | CG32488-PB | 1..307 | 1..307 | 604 | 39.3 | Plus |
| CG32488-PA | 307 | CG32488-PA | 1..307 | 1..307 | 604 | 39.3 | Plus |
| CG5567-PA | 330 | CG5567-PA | 16..315 | 1..299 | 521 | 37.3 | Plus |
| CG32487-PA | 320 | CG32487-PA | 19..315 | 12..306 | 461 | 35.9 | Plus |
