BO30013.complete Sequence
838 bp assembled on 2012-04-24
GenBank Submission: KX797080
> BO30013.complete
GAAGTTATCAGTCGACATGCTTCTGCGATCTCTACCAATTTTCCTTGCAC
TCTTTGTCCTTTCCAAAAGTGACACGGGTGCAGGTGAAGATTCGGAAGAG
GACGACGAAAACGACTGCAACCGGACGACTCTTGGTGGTCATCCCGTGAA
CATAACCACAGCGCCATGGATTGCTTCCATTTCGATCAAACAAAAGGCCA
AGTGCGACGGAGCGATATACAAACTGAGTCACATTGTGACAGCCGGGAAA
TGTGTGGATGGATTCCTGAACAAGGTGATCCGTGTACGAGTGGGTAGCAC
TACGCGCAGCGATGGAGTCATCGAAGTAGCAGTCTGCAACATTACAGTTC
ACGAAAAGTTCACCGGCCAGACAGTATTTCACAATGTGGCCATATTAAAG
TTGTGCGAACCGCTCGAGGCCTCCAAAACGATCCAGCCAATTCAGTTGGC
CAACCAGCTTCCGTCTAATGGGGCAAAGGTCACGGCCAACGGGTGGCCCT
CCTTCAGGTGGTGGGCAATGTATTGGAAGAAGTGTCTGGATGATGAAGCC
TACAAGCTGCAGAAGGCCGAGGTGAAGCTACTTGGCCCTAGCCAGTGCAC
AGATCTGTGGGCGCGAAACAATTGGTCCAAAAAGAATTTTACAGATGACT
TGTTCTGCACCGAGAAGTTCGCTAAGGAAGCCTGCTCTTTAGCGATGGGA
TCACCTGTGGTCCACAATGGCAAACTGGTCGGCATTATAACGAAAGGCGG
CTGTTCGGAGTATCCAGAAGTCTATATCAATCTTATAAAGTACAAGGACT
GGCTGCATAATCATACAAAGGCAAGCTTTCTAGACCAT
BO30013.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:52:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32833-RA | 807 | CG32833-PA | 1..804 | 17..820 | 4020 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:52:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32833-RA | 1062 | CG32833-RA | 20..824 | 16..820 | 4025 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:52:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22984511..22985315 | 820..16 | 4025 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:52:05 has no hits.
BO30013.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:01:04 Download gff for
BO30013.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32833-RA | 1..804 | 17..822 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:32 Download gff for
BO30013.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32833-RA | 21..824 | 17..822 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:59:19 Download gff for
BO30013.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32833-RA | 21..824 | 17..822 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:59:19 Download gff for
BO30013.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22984509..22985314 | 17..822 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:32 Download gff for
BO30013.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18872032..18872837 | 17..822 | 99 | | Minus |
BO30013.pep Sequence
Translation from 16 to 838
> BO30013.pep
MLLRSLPIFLALFVLSKSDTGAGEDSEEDDENDCNRTTLGGHPVNITTAP
WIASISIKQKAKCDGAIYKLSHIVTAGKCVDGFLNKVIRVRVGSTTRSDG
VIEVAVCNITVHEKFTGQTVFHNVAILKLCEPLEASKTIQPIQLANQLPS
NGAKVTANGWPSFRWWAMYWKKCLDDEAYKLQKAEVKLLGPSQCTDLWAR
NNWSKKNFTDDLFCTEKFAKEACSLAMGSPVVHNGKLVGIITKGGCSEYP
EVYINLIKYKDWLHNHTKASFLDH
BO30013.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:14:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32833-PA | 268 | CG32833-PA | 1..268 | 1..268 | 1440 | 100 | Plus |
| CG9897-PA | 247 | CG9897-PA | 24..246 | 39..268 | 371 | 34.6 | Plus |
| CG32834-PB | 556 | CG32834-PB | 22..257 | 33..268 | 360 | 35.3 | Plus |
| Ser12-PA | 245 | CG17240-PA | 25..240 | 39..265 | 303 | 31.6 | Plus |
| CG30025-PA | 253 | CG30025-PA | 32..252 | 39..266 | 281 | 29.4 | Plus |
